Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AIG1P1-201ENST00000503376 148 ntBASIC2.43□□□□□ -2.02
HMGXB3Q12766 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.43□□□□□ -2.02
HMGXB3Q12766 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGXB3Q12766 AP005435.4-201ENST00000529514 284 ntBASIC2.43□□□□□ -2.02
HMGXB3Q12766 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.43□□□□□ -2.02
HMGXB3Q12766 AC084364.2-201ENST00000546924 395 ntBASIC2.43□□□□□ -2.02
HMGXB3Q12766 HSPE1P3-201ENST00000559254 309 ntBASIC2.43□□□□□ -2.02
HMGXB3Q12766 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGXB3Q12766 AP005137.2-201ENST00000609238 400 ntBASIC2.43□□□□□ -2.02
HMGXB3Q12766 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
HMGXB3Q12766 RNA5SP167-201ENST00000365461 116 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.42□□□□□ -2.02
HMGXB3Q12766 HMGN2P19-201ENST00000425149 265 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 AL513321.1-201ENST00000441175 761 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 VN1R96P-201ENST00000446052 858 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.42□□□□□ -2.02
HMGXB3Q12766 AP000873.1-201ENST00000463987 400 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 RPS29P1-201ENST00000465274 159 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 RNA5SP476-201ENST00000516613 103 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.42□□□□□ -2.02
HMGXB3Q12766 AP005660.1-201ENST00000522972 293 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.42□□□□□ -2.02
HMGXB3Q12766 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.42□□□□□ -2.02
HMGXB3Q12766 MIR4512-201ENST00000583257 77 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 MIR4448-201ENST00000584360 86 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 AC009318.3-201ENST00000616916 503 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 RBBP8P1-201ENST00000449447 1844 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HMGXB3Q12766 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HMGXB3Q12766 MIR625-201ENST00000385047 85 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 MIR320A-201ENST00000385302 82 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 AL357078.2-201ENST00000416486 427 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
HMGXB3Q12766 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.42□□□□□ -2.02
HMGXB3Q12766 AC093281.2-201ENST00000510153 597 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.42□□□□□ -2.02
HMGXB3Q12766 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.42□□□□□ -2.02
HMGXB3Q12766 AC091895.1-201ENST00000624494 256 ntBASIC2.42□□□□□ -2.02
HMGXB3Q12766 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HMGXB3Q12766 SNRPEP2-201ENST00000397592 279 ntBASIC2.41□□□□□ -2.02
HMGXB3Q12766 AC013268.2-201ENST00000420753 337 ntBASIC2.41□□□□□ -2.02
HMGXB3Q12766 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.41□□□□□ -2.02
HMGXB3Q12766 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.41□□□□□ -2.02
HMGXB3Q12766 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HMGXB3Q12766 AL359273.1-201ENST00000510918 627 ntBASIC2.41□□□□□ -2.02
HMGXB3Q12766 AC010200.2-201ENST00000605098 235 ntBASIC2.41□□□□□ -2.02
HMGXB3Q12766 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.41□□□□□ -2.02
HMGXB3Q12766 AC011477.1-204ENST00000623416 1325 ntBASIC2.41□□□□□ -2.02
HMGXB3Q12766 MAPK10-266ENST00000641066 6555 ntBASIC2.4□□□□□ -2.02
HMGXB3Q12766 MTCO1P4-201ENST00000520516 1409 ntBASIC2.4□□□□□ -2.03
HMGXB3Q12766 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.4□□□□□ -2.03
HMGXB3Q12766 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.4□□□□□ -2.03
HMGXB3Q12766 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.4□□□□□ -2.03
HMGXB3Q12766 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.4□□□□□ -2.03
HMGXB3Q12766 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.4□□□□□ -2.03
HMGXB3Q12766 RPL21P5-201ENST00000554662 472 ntBASIC2.4□□□□□ -2.03
HMGXB3Q12766 MIR4446-201ENST00000578505 67 ntBASIC2.4□□□□□ -2.03
HMGXB3Q12766 AC083806.3-201ENST00000614016 455 ntBASIC2.4□□□□□ -2.03
HMGXB3Q12766 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
HMGXB3Q12766 CDC27P3-201ENST00000635418 1910 ntBASIC2.39□□□□□ -2.03
HMGXB3Q12766 RNU6-1032P-201ENST00000384100 107 ntBASIC2.39□□□□□ -2.03
HMGXB3Q12766 MIR124-3-201ENST00000384866 87 ntBASIC2.39□□□□□ -2.03
HMGXB3Q12766 MIR598-201ENST00000384868 97 ntBASIC2.39□□□□□ -2.03
HMGXB3Q12766 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.39□□□□□ -2.03
HMGXB3Q12766 MTND2P2-201ENST00000434633 945 ntBASIC2.39□□□□□ -2.03
HMGXB3Q12766 AC090774.1-201ENST00000435925 246 ntBASIC2.39□□□□□ -2.03
HMGXB3Q12766 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HMGXB3Q12766 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGXB3Q12766 AC239860.2-201ENST00000525886 270 ntBASIC2.39□□□□□ -2.03
HMGXB3Q12766 HSPE1P20-201ENST00000538133 289 ntBASIC2.39□□□□□ -2.03
HMGXB3Q12766 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGXB3Q12766 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGXB3Q12766 MIR4458-201ENST00000578872 75 ntBASIC2.39□□□□□ -2.03
HMGXB3Q12766 MIR4716-201ENST00000579628 84 ntBASIC2.39□□□□□ -2.03
HMGXB3Q12766 VN1R84P-201ENST00000593697 235 ntBASIC2.39□□□□□ -2.03
HMGXB3Q12766 AC097468.3-201ENST00000607956 456 ntBASIC2.39□□□□□ -2.03
HMGXB3Q12766 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.39□□□□□ -2.03
HMGXB3Q12766 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.39□□□□□ -2.03
HMGXB3Q12766 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HMGXB3Q12766 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGXB3Q12766 MIR1304-201ENST00000408243 91 ntBASIC2.38□□□□□ -2.03
HMGXB3Q12766 RPS12P24-201ENST00000412619 387 ntBASIC2.38□□□□□ -2.03
HMGXB3Q12766 MTCYBP7-201ENST00000419540 1134 ntBASIC2.38□□□□□ -2.03
HMGXB3Q12766 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGXB3Q12766 OR51B8P-201ENST00000449892 769 ntBASIC2.38□□□□□ -2.03
HMGXB3Q12766 AC104308.1-201ENST00000454621 333 ntBASIC2.38□□□□□ -2.03
HMGXB3Q12766 HMGB3P30-201ENST00000457863 606 ntBASIC2.38□□□□□ -2.03
HMGXB3Q12766 snoU109.4-201ENST00000458953 143 ntBASIC2.38□□□□□ -2.03
HMGXB3Q12766 LDHBP3-201ENST00000514909 822 ntBASIC2.38□□□□□ -2.03
HMGXB3Q12766 AC109446.2-201ENST00000567872 497 ntBASIC2.38□□□□□ -2.03
HMGXB3Q12766 AC025016.1-201ENST00000616746 682 ntBASIC2.38□□□□□ -2.03
HMGXB3Q12766 AL158801.5-201ENST00000623123 465 ntBASIC2.38□□□□□ -2.03
HMGXB3Q12766 Z82195.2-201ENST00000612348 18351 ntBASIC2.38□□□□□ -2.03
HMGXB3Q12766 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HMGXB3Q12766 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.38□□□□□ -2.03
HMGXB3Q12766 RNU1-109P-201ENST00000383960 147 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 MIR520E-201ENST00000384867 87 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 MIR222-201ENST00000384992 110 ntBASIC2.37□□□□□ -2.03
HMGXB3Q12766 HSPE1P26-201ENST00000405341 275 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms