Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SNORA31.23-201ENST00000517219 133 ntBASIC1.57□□□□□ -2.16
CKS1BP61024 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.57□□□□□ -2.16
CKS1BP61024 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.57□□□□□ -2.16
CKS1BP61024 OR5AK3P-201ENST00000527486 1297 ntBASIC1.57□□□□□ -2.16
CKS1BP61024 AC021269.2-201ENST00000532318 330 ntBASIC1.57□□□□□ -2.16
CKS1BP61024 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.57□□□□□ -2.16
CKS1BP61024 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.57□□□□□ -2.16
CKS1BP61024 MTCO3P22-201ENST00000603219 784 ntBASIC1.57□□□□□ -2.16
CKS1BP61024 AC005229.3-201ENST00000603438 323 ntBASIC1.57□□□□□ -2.16
CKS1BP61024 AC024220.1-201ENST00000603675 484 ntBASIC1.57□□□□□ -2.16
CKS1BP61024 AC007179.3-201ENST00000604976 235 ntBASIC1.57□□□□□ -2.16
CKS1BP61024 OR2AS2P-201ENST00000606902 342 ntBASIC1.57□□□□□ -2.16
CKS1BP61024 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CKS1BP61024 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.57□□□□□ -2.16
CKS1BP61024 MIR1291-201ENST00000627649 87 ntBASIC1.57□□□□□ -2.16
CKS1BP61024 AC017104.5-201ENST00000637647 639 ntBASIC1.57□□□□□ -2.16
CKS1BP61024 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
CKS1BP61024 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CKS1BP61024 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CKS1BP61024 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CKS1BP61024 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CKS1BP61024 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CKS1BP61024 FTLP6-201ENST00000355274 422 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 MIR649-201ENST00000384843 97 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CKS1BP61024 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CKS1BP61024 AC092745.2-202ENST00000411880 369 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 SNORD56-201ENST00000413522 71 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 Z85995.1-201ENST00000415547 335 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 AC091390.3-201ENST00000426478 338 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 AC093106.2-201ENST00000428212 385 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 FCF1P1-201ENST00000432690 571 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 TAAR7P-201ENST00000436141 242 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 AC000041.1-201ENST00000439655 175 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 MTCO3P17-201ENST00000443775 513 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 AC011825.1-201ENST00000484967 388 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.56□□□□□ -2.16
CKS1BP61024 AP000926.3-201ENST00000497201 299 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.56□□□□□ -2.16
CKS1BP61024 AC026436.1-201ENST00000510537 270 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.56□□□□□ -2.16
CKS1BP61024 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.56□□□□□ -2.16
CKS1BP61024 AC026801.2-201ENST00000515352 425 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.56□□□□□ -2.16
CKS1BP61024 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.56□□□□□ -2.16
CKS1BP61024 MIR4299-201ENST00000577899 72 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.56□□□□□ -2.16
CKS1BP61024 AC007621.1-201ENST00000604544 437 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 OR4G2P-202ENST00000641004 1759 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CKS1BP61024 AL390862.1-201ENST00000635467 1469 ntBASIC1.56□□□□□ -2.16
CKS1BP61024 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CKS1BP61024 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.55□□□□□ -2.16
CKS1BP61024 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.55□□□□□ -2.16
CKS1BP61024 ANKRD36P1-201ENST00000344424 659 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 RNU6-921P-201ENST00000384361 107 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 MIR34A-201ENST00000385130 110 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CKS1BP61024 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.55□□□□□ -2.16
CKS1BP61024 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.55□□□□□ -2.16
CKS1BP61024 AL009174.1-201ENST00000426577 416 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 HMGB1P9-201ENST00000429856 646 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 MICF-203ENST00000432679 129 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.55□□□□□ -2.16
CKS1BP61024 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.55□□□□□ -2.16
CKS1BP61024 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.55□□□□□ -2.16
CKS1BP61024 AC093155.1-201ENST00000440164 826 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 AC009237.8-201ENST00000445492 379 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.55□□□□□ -2.16
CKS1BP61024 RPL23AP3-201ENST00000453844 468 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.55□□□□□ -2.16
CKS1BP61024 snoU109.1-201ENST00000459339 135 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 RPL36AP51-201ENST00000487216 318 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 MTCO2P9-201ENST00000503214 694 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.55□□□□□ -2.16
CKS1BP61024 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.55□□□□□ -2.16
CKS1BP61024 RNA5SP320-201ENST00000516263 124 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 SNORA70.24-201ENST00000517233 118 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.55□□□□□ -2.16
CKS1BP61024 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.55□□□□□ -2.16
CKS1BP61024 AC118273.2-201ENST00000532092 465 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.55□□□□□ -2.16
CKS1BP61024 MTCYBP27-201ENST00000555160 670 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.55□□□□□ -2.16
CKS1BP61024 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.55□□□□□ -2.16
CKS1BP61024 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.55□□□□□ -2.16
CKS1BP61024 AC013444.2-201ENST00000603317 787 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 AC006023.1-201ENST00000603944 259 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 AC018618.2-201ENST00000604770 446 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 AL450472.3-201ENST00000615578 367 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.55□□□□□ -2.16
CKS1BP61024 AC004777.1-201ENST00000624317 287 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 AC092608.3-201ENST00000625017 386 ntBASIC1.55□□□□□ -2.16
CKS1BP61024 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
CKS1BP61024 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
CKS1BP61024 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.54□□□□□ -2.16
CKS1BP61024 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CKS1BP61024 SNORD46.1-201ENST00000364139 104 ntBASIC1.54□□□□□ -2.16
CKS1BP61024 SUMO2P12-201ENST00000405924 140 ntBASIC1.54□□□□□ -2.16
CKS1BP61024 RNU2-52P-201ENST00000410680 190 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms