Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNU6-859P-201ENST00000362728 107 ntBASIC2.48□□□□□ -2.01
RFC3P40938 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
RFC3P40938 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RFC3P40938 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.48□□□□□ -2.01
RFC3P40938 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.48□□□□□ -2.01
RFC3P40938 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.48□□□□□ -2.01
RFC3P40938 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.48□□□□□ -2.01
RFC3P40938 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.48□□□□□ -2.01
RFC3P40938 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.48□□□□□ -2.01
RFC3P40938 AC090774.1-201ENST00000435925 246 ntBASIC2.48□□□□□ -2.01
RFC3P40938 GTF2IP7-202ENST00000436677 309 ntBASIC2.48□□□□□ -2.01
RFC3P40938 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.48□□□□□ -2.01
RFC3P40938 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.48□□□□□ -2.01
RFC3P40938 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.48□□□□□ -2.01
RFC3P40938 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.48□□□□□ -2.01
RFC3P40938 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.48□□□□□ -2.01
RFC3P40938 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.48□□□□□ -2.01
RFC3P40938 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.48□□□□□ -2.01
RFC3P40938 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.48□□□□□ -2.01
RFC3P40938 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.48□□□□□ -2.01
RFC3P40938 AC114781.4-201ENST00000513707 639 ntBASIC2.48□□□□□ -2.01
RFC3P40938 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.48□□□□□ -2.01
RFC3P40938 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RFC3P40938 AC087373.1-201ENST00000524920 491 ntBASIC2.48□□□□□ -2.01
RFC3P40938 DEFB130C-202ENST00000530001 230 ntBASIC2.48□□□□□ -2.01
RFC3P40938 AP000857.1-201ENST00000532151 543 ntBASIC2.48□□□□□ -2.01
RFC3P40938 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.48□□□□□ -2.01
RFC3P40938 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.48□□□□□ -2.01
RFC3P40938 AC027807.1-201ENST00000559921 996 ntBASIC2.48□□□□□ -2.01
RFC3P40938 AMZ2P1-203ENST00000565833 850 ntBASIC2.48□□□□□ -2.01
RFC3P40938 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.48□□□□□ -2.01
RFC3P40938 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.48□□□□□ -2.01
RFC3P40938 AL356575.1-201ENST00000603008 283 ntBASIC2.48□□□□□ -2.01
RFC3P40938 AP002802.2-201ENST00000605877 235 ntBASIC2.48□□□□□ -2.01
RFC3P40938 AL596245.1-201ENST00000618994 362 ntBASIC2.48□□□□□ -2.01
RFC3P40938 AC084824.4-201ENST00000620106 731 ntBASIC2.48□□□□□ -2.01
RFC3P40938 AC010297.1-201ENST00000623948 149 ntBASIC2.48□□□□□ -2.01
RFC3P40938 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RFC3P40938 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.48□□□□□ -2.01
RFC3P40938 RNU6-198P-201ENST00000384258 104 ntBASIC2.47□□□□□ -2.01
RFC3P40938 MTCO1P56-201ENST00000401674 224 ntBASIC2.47□□□□□ -2.01
RFC3P40938 RNA5SP21-201ENST00000410917 96 ntBASIC2.47□□□□□ -2.01
RFC3P40938 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.47□□□□□ -2.01
RFC3P40938 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.47□□□□□ -2.01
RFC3P40938 C1DP1-201ENST00000426049 402 ntBASIC2.47□□□□□ -2.01
RFC3P40938 THAP5P1-201ENST00000439089 262 ntBASIC2.47□□□□□ -2.01
RFC3P40938 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RFC3P40938 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.47□□□□□ -2.01
RFC3P40938 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.47□□□□□ -2.01
RFC3P40938 MTCO3P11-201ENST00000455103 774 ntBASIC2.47□□□□□ -2.01
RFC3P40938 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.47□□□□□ -2.01
RFC3P40938 AC092798.1-201ENST00000458542 409 ntBASIC2.47□□□□□ -2.01
RFC3P40938 TMEM251P1-201ENST00000503717 318 ntBASIC2.47□□□□□ -2.01
RFC3P40938 NAMPTP2-201ENST00000505629 1115 ntBASIC2.47□□□□□ -2.01
RFC3P40938 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.47□□□□□ -2.01
RFC3P40938 AC009901.1-201ENST00000506703 541 ntBASIC2.47□□□□□ -2.01
RFC3P40938 TBCAP3-201ENST00000512475 312 ntBASIC2.47□□□□□ -2.01
RFC3P40938 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.47□□□□□ -2.01
RFC3P40938 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.47□□□□□ -2.01
RFC3P40938 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.47□□□□□ -2.01
RFC3P40938 AC234778.2-201ENST00000566241 354 ntBASIC2.47□□□□□ -2.01
RFC3P40938 AC008507.2-201ENST00000588402 1176 ntBASIC2.47□□□□□ -2.01
RFC3P40938 RPL23AP78-201ENST00000599928 470 ntBASIC2.47□□□□□ -2.01
RFC3P40938 DUXAP10-204ENST00000612052 616 ntBASIC2.47□□□□□ -2.01
RFC3P40938 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RFC3P40938 AC110079.1-202ENST00000635213 138 ntBASIC2.47□□□□□ -2.01
RFC3P40938 FO624990.1-201ENST00000636373 85 ntBASIC2.47□□□□□ -2.01
RFC3P40938 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RFC3P40938 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.47□□□□□ -2.01
RFC3P40938 AC012321.1-201ENST00000561622 1588 ntBASIC2.47□□□□□ -2.01
RFC3P40938 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.47□□□□□ -2.01
RFC3P40938 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
RFC3P40938 AC138915.1-201ENST00000565427 1685 ntBASIC2.47□□□□□ -2.01
RFC3P40938 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RFC3P40938 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RFC3P40938 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
RFC3P40938 RNU4-82P-201ENST00000362443 140 ntBASIC2.46□□□□□ -2.02
RFC3P40938 SNORD21-201ENST00000383953 95 ntBASIC2.46□□□□□ -2.02
RFC3P40938 RNU6-76P-201ENST00000384060 104 ntBASIC2.46□□□□□ -2.02
RFC3P40938 CCDC58P2-201ENST00000417131 366 ntBASIC2.46□□□□□ -2.02
RFC3P40938 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.46□□□□□ -2.02
RFC3P40938 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.46□□□□□ -2.02
RFC3P40938 NDUFB4P7-201ENST00000423198 363 ntBASIC2.46□□□□□ -2.02
RFC3P40938 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.46□□□□□ -2.02
RFC3P40938 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.46□□□□□ -2.02
RFC3P40938 TAAR7P-201ENST00000436141 242 ntBASIC2.46□□□□□ -2.02
RFC3P40938 AC129850.1-201ENST00000436203 508 ntBASIC2.46□□□□□ -2.02
RFC3P40938 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.46□□□□□ -2.02
RFC3P40938 RNU6-420P-201ENST00000458780 107 ntBASIC2.46□□□□□ -2.02
RFC3P40938 AP000852.1-201ENST00000472460 573 ntBASIC2.46□□□□□ -2.02
RFC3P40938 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.46□□□□□ -2.02
RFC3P40938 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.46□□□□□ -2.02
RFC3P40938 MTCYBP16-201ENST00000509187 1129 ntBASIC2.46□□□□□ -2.02
RFC3P40938 AC087808.1-201ENST00000520501 361 ntBASIC2.46□□□□□ -2.02
RFC3P40938 NDUFS5P6-201ENST00000529136 295 ntBASIC2.46□□□□□ -2.02
RFC3P40938 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.46□□□□□ -2.02
RFC3P40938 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RFC3P40938 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.46□□□□□ -2.02
RFC3P40938 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.46□□□□□ -2.02
RFC3P40938 AC008739.2-201ENST00000597006 317 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms