Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC006927.4-201ENST00000639187 543 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
XRCC1P18887 AC011477.1-204ENST00000623416 1325 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 CUL1P1-201ENST00000509510 2425 ntBASIC2.89□□□□□ -1.95
XRCC1P18887 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
XRCC1P18887 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
XRCC1P18887 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
XRCC1P18887 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.88□□□□□ -1.95
XRCC1P18887 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.88□□□□□ -1.95
XRCC1P18887 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
XRCC1P18887 SNORA80A-201ENST00000363922 136 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 Y_RNA.234-201ENST00000364409 97 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 ANAPC10P1-201ENST00000395991 556 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 RPS3AP26-201ENST00000398259 784 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 MIR1290-201ENST00000408735 78 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.88□□□□□ -1.95
XRCC1P18887 MRPL50P2-201ENST00000416821 482 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 HMGB1P49-201ENST00000418882 569 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.88□□□□□ -1.95
XRCC1P18887 AC233728.2-201ENST00000425348 757 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 AL139132.1-201ENST00000431587 344 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 MTND3P1-201ENST00000441336 220 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.88□□□□□ -1.95
XRCC1P18887 COX6CP2-201ENST00000444980 225 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.88□□□□□ -1.95
XRCC1P18887 AC002381.1-201ENST00000447049 280 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 MTND1P9-201ENST00000453775 944 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 AC234775.1-201ENST00000454247 670 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.88□□□□□ -1.95
XRCC1P18887 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.88□□□□□ -1.95
XRCC1P18887 SNORD121B-201ENST00000458838 81 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
XRCC1P18887 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.88□□□□□ -1.95
XRCC1P18887 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.88□□□□□ -1.95
XRCC1P18887 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.88□□□□□ -1.95
XRCC1P18887 AC021146.8-201ENST00000507455 733 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 AC024589.1-201ENST00000512207 263 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 RNU6-711P-201ENST00000517255 106 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 MTND2P32-201ENST00000521584 1038 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 FAM60DP-201ENST00000524174 632 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.88□□□□□ -1.95
XRCC1P18887 AC022690.1-201ENST00000526681 550 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.88□□□□□ -1.95
XRCC1P18887 AL020991.1-201ENST00000612314 373 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 AL590099.1-201ENST00000615276 138 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 AL078595.3-201ENST00000623815 1166 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 AC068787.1-201ENST00000623908 691 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 AL137790.1-201ENST00000634283 177 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.88□□□□□ -1.95
XRCC1P18887 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.88□□□□□ -1.95
XRCC1P18887 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
XRCC1P18887 MTCO1P9-201ENST00000505577 1534 ntBASIC2.88□□□□□ -1.95
XRCC1P18887 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
XRCC1P18887 RNU6-7-201ENST00000364784 107 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 RNU6-8-201ENST00000365467 107 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
XRCC1P18887 SNORD88.1-201ENST00000408684 91 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 AC109780.2-201ENST00000413467 845 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.87□□□□□ -1.95
XRCC1P18887 SSXP9-201ENST00000417503 292 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.87□□□□□ -1.95
XRCC1P18887 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.87□□□□□ -1.95
XRCC1P18887 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.87□□□□□ -1.95
XRCC1P18887 MTATP6P4-201ENST00000427725 675 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 AC024082.2-201ENST00000434771 238 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 CR769776.1-201ENST00000441254 787 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 AL831737.1-201ENST00000441288 271 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.87□□□□□ -1.95
XRCC1P18887 RPL36AP33-201ENST00000450395 310 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 USP9YP25-201ENST00000457708 443 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 SNORD11.1-201ENST00000459482 85 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 MEMO1P3-201ENST00000459811 302 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 AP001486.1-201ENST00000463339 476 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 AL049873.1-201ENST00000480540 376 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 RPL9P33-201ENST00000484311 566 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.87□□□□□ -1.95
XRCC1P18887 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
XRCC1P18887 CBX3P3-201ENST00000508108 532 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 AL359273.1-201ENST00000510918 627 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.87□□□□□ -1.95
XRCC1P18887 SCGB1D5P-201ENST00000515134 247 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 RNU6-528P-201ENST00000516926 100 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 RNU6-714P-201ENST00000516963 103 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.87□□□□□ -1.95
XRCC1P18887 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.87□□□□□ -1.95
XRCC1P18887 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
XRCC1P18887 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.87□□□□□ -1.95
XRCC1P18887 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.87□□□□□ -1.95
XRCC1P18887 AC087465.1-201ENST00000560574 245 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.87□□□□□ -1.95
XRCC1P18887 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
XRCC1P18887 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.87□□□□□ -1.95
XRCC1P18887 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.87□□□□□ -1.95
XRCC1P18887 AC112220.3-201ENST00000605502 502 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 AL627309.6-201ENST00000606857 840 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 AC007349.4-201ENST00000608114 532 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 AC002076.2-201ENST00000617362 122 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 AC013470.4-201ENST00000619978 986 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 AC006386.2-201ENST00000624491 75 ntBASIC2.87□□□□□ -1.95
XRCC1P18887 AC012005.1-201ENST00000624575 75 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms