Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 FO393413.1-201ENST00000402892 195 ntBASIC2.25□□□□□ -2.05
TOP2AP11388 RNU2-25P-201ENST00000411041 191 ntBASIC2.25□□□□□ -2.05
TOP2AP11388 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.25□□□□□ -2.05
TOP2AP11388 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.25□□□□□ -2.05
TOP2AP11388 LSM1P1-201ENST00000438629 273 ntBASIC2.25□□□□□ -2.05
TOP2AP11388 HMGB3P21-201ENST00000452483 547 ntBASIC2.25□□□□□ -2.05
TOP2AP11388 AP002345.1-201ENST00000456493 928 ntBASIC2.25□□□□□ -2.05
TOP2AP11388 AC112503.2-201ENST00000609005 552 ntBASIC2.25□□□□□ -2.05
TOP2AP11388 AL110115.1-201ENST00000614396 364 ntBASIC2.25□□□□□ -2.05
TOP2AP11388 AC022709.1-201ENST00000615967 87 ntBASIC2.25□□□□□ -2.05
TOP2AP11388 AC140725.3-201ENST00000616193 880 ntBASIC2.25□□□□□ -2.05
TOP2AP11388 MTND5P12-201ENST00000502851 1449 ntBASIC2.24□□□□□ -2.05
TOP2AP11388 Y_RNA.354-201ENST00000365448 111 ntBASIC2.24□□□□□ -2.05
TOP2AP11388 RNU6-203P-201ENST00000384038 104 ntBASIC2.24□□□□□ -2.05
TOP2AP11388 RPS6P14-201ENST00000425165 719 ntBASIC2.24□□□□□ -2.05
TOP2AP11388 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.24□□□□□ -2.05
TOP2AP11388 AC022431.1-201ENST00000450941 438 ntBASIC2.24□□□□□ -2.05
TOP2AP11388 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.24□□□□□ -2.05
TOP2AP11388 AC006390.1-201ENST00000508068 283 ntBASIC2.24□□□□□ -2.05
TOP2AP11388 AC008885.2-201ENST00000509506 930 ntBASIC2.24□□□□□ -2.05
TOP2AP11388 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.24□□□□□ -2.05
TOP2AP11388 AC006329.2-201ENST00000611491 394 ntBASIC2.24□□□□□ -2.05
TOP2AP11388 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.24□□□□□ -2.05
TOP2AP11388 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
TOP2AP11388 AC008568.2-201ENST00000623862 2313 ntBASIC2.24□□□□□ -2.05
TOP2AP11388 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.23□□□□□ -2.05
TOP2AP11388 RPS12P24-201ENST00000412619 387 ntBASIC2.23□□□□□ -2.05
TOP2AP11388 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.23□□□□□ -2.05
TOP2AP11388 AC239798.3-201ENST00000454459 408 ntBASIC2.23□□□□□ -2.05
TOP2AP11388 HSPE1P22-201ENST00000456856 327 ntBASIC2.23□□□□□ -2.05
TOP2AP11388 SNORD108-201ENST00000459332 71 ntBASIC2.23□□□□□ -2.05
TOP2AP11388 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.23□□□□□ -2.05
TOP2AP11388 MTCO3P24-201ENST00000572729 782 ntBASIC2.23□□□□□ -2.05
TOP2AP11388 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.23□□□□□ -2.05
TOP2AP11388 MIR6779-201ENST00000617283 64 ntBASIC2.23□□□□□ -2.05
TOP2AP11388 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
TOP2AP11388 RPL23AP47-201ENST00000408017 460 ntBASIC2.22□□□□□ -2.05
TOP2AP11388 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.22□□□□□ -2.05
TOP2AP11388 RPS3AP22-201ENST00000488297 769 ntBASIC2.22□□□□□ -2.05
TOP2AP11388 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.22□□□□□ -2.05
TOP2AP11388 DUXAP4-201ENST00000603046 613 ntBASIC2.22□□□□□ -2.05
TOP2AP11388 CFTRP2-201ENST00000634304 199 ntBASIC2.22□□□□□ -2.05
TOP2AP11388 MIR203B-201ENST00000636080 86 ntBASIC2.22□□□□□ -2.05
TOP2AP11388 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
TOP2AP11388 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
TOP2AP11388 SNORA67.1-201ENST00000364749 141 ntBASIC2.22□□□□□ -2.05
TOP2AP11388 AL030996.1-201ENST00000411430 235 ntBASIC2.22□□□□□ -2.05
TOP2AP11388 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.22□□□□□ -2.05
TOP2AP11388 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.22□□□□□ -2.05
TOP2AP11388 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.22□□□□□ -2.05
TOP2AP11388 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
TOP2AP11388 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.22□□□□□ -2.05
TOP2AP11388 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.22□□□□□ -2.05
TOP2AP11388 MIR4458-201ENST00000578872 75 ntBASIC2.22□□□□□ -2.05
TOP2AP11388 RN7SL622P-201ENST00000585292 275 ntBASIC2.22□□□□□ -2.05
TOP2AP11388 HSPE1P14-201ENST00000605812 302 ntBASIC2.22□□□□□ -2.05
TOP2AP11388 XKRY2-202ENST00000623874 1581 ntBASIC2.21□□□□□ -2.06
TOP2AP11388 XKRY-202ENST00000624960 1581 ntBASIC2.21□□□□□ -2.06
TOP2AP11388 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
TOP2AP11388 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TOP2AP11388 RNU6-1320P-201ENST00000390838 107 ntBASIC2.21□□□□□ -2.06
TOP2AP11388 RNU6-1269P-201ENST00000391139 107 ntBASIC2.21□□□□□ -2.06
TOP2AP11388 AC007098.1-201ENST00000420122 367 ntBASIC2.21□□□□□ -2.06
TOP2AP11388 RPS4XP11-201ENST00000446897 772 ntBASIC2.21□□□□□ -2.06
TOP2AP11388 RNU6-599P-201ENST00000459383 107 ntBASIC2.21□□□□□ -2.06
TOP2AP11388 RNU6-1193P-201ENST00000459461 107 ntBASIC2.21□□□□□ -2.06
TOP2AP11388 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.21□□□□□ -2.06
TOP2AP11388 HAUS1P1-201ENST00000505275 832 ntBASIC2.21□□□□□ -2.06
TOP2AP11388 OR4R1P-201ENST00000529879 463 ntBASIC2.21□□□□□ -2.06
TOP2AP11388 MTATP6P3-201ENST00000581686 676 ntBASIC2.21□□□□□ -2.06
TOP2AP11388 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.21□□□□□ -2.06
TOP2AP11388 AC121761.2-201ENST00000617300 689 ntBASIC2.21□□□□□ -2.06
TOP2AP11388 RNU6-368P-201ENST00000620928 107 ntBASIC2.21□□□□□ -2.06
TOP2AP11388 RNU6-538P-201ENST00000622329 107 ntBASIC2.21□□□□□ -2.06
TOP2AP11388 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
TOP2AP11388 AL136164.4-201ENST00000625013 2135 ntBASIC2.2□□□□□ -2.06
TOP2AP11388 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TOP2AP11388 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
TOP2AP11388 SNORA31-201ENST00000362607 130 ntBASIC2.2□□□□□ -2.06
TOP2AP11388 AL033519.2-201ENST00000403958 392 ntBASIC2.2□□□□□ -2.06
TOP2AP11388 FABP5P3-201ENST00000437960 408 ntBASIC2.2□□□□□ -2.06
TOP2AP11388 RPS15AP17-201ENST00000470598 390 ntBASIC2.2□□□□□ -2.06
TOP2AP11388 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.2□□□□□ -2.06
TOP2AP11388 AC113155.1-201ENST00000511141 769 ntBASIC2.2□□□□□ -2.06
TOP2AP11388 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.2□□□□□ -2.06
TOP2AP11388 RPPH1-2P-201ENST00000516688 293 ntBASIC2.2□□□□□ -2.06
TOP2AP11388 OR5AQ1P-201ENST00000527596 927 ntBASIC2.2□□□□□ -2.06
TOP2AP11388 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.2□□□□□ -2.06
TOP2AP11388 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.2□□□□□ -2.06
TOP2AP11388 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.2□□□□□ -2.06
TOP2AP11388 AC008121.3-201ENST00000618726 433 ntBASIC2.2□□□□□ -2.06
TOP2AP11388 AC091895.1-201ENST00000624494 256 ntBASIC2.2□□□□□ -2.06
TOP2AP11388 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.19□□□□□ -2.06
TOP2AP11388 FO393415.2-201ENST00000480085 343 ntBASIC2.19□□□□□ -2.06
TOP2AP11388 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TOP2AP11388 IGKV2D-36-201ENST00000518643 226 ntBASIC2.19□□□□□ -2.06
TOP2AP11388 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.19□□□□□ -2.06
TOP2AP11388 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.19□□□□□ -2.06
TOP2AP11388 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TOP2AP11388 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms