Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL357552.1-201ENST00000445254 415 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.18□□□□□ -1.9
PDGFBP01127 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.18□□□□□ -1.9
PDGFBP01127 AC008264.1-201ENST00000447612 367 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 AL049714.1-201ENST00000466686 347 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.18□□□□□ -1.9
PDGFBP01127 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.18□□□□□ -1.9
PDGFBP01127 MTCYBP43-201ENST00000513621 740 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 SNORA3.4-201ENST00000515969 96 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.18□□□□□ -1.9
PDGFBP01127 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.18□□□□□ -1.9
PDGFBP01127 ZNF321P-202ENST00000550843 495 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.18□□□□□ -1.9
PDGFBP01127 AC009712.1-201ENST00000564938 316 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.18□□□□□ -1.9
PDGFBP01127 CYCSP39-201ENST00000565821 309 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.18□□□□□ -1.9
PDGFBP01127 AC099489.2-201ENST00000574976 260 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 MIR4425-201ENST00000580572 84 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 AC105224.1-201ENST00000587055 421 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 AL353778.1-201ENST00000603149 408 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.18□□□□□ -1.9
PDGFBP01127 AC011451.2-201ENST00000604303 598 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 uc_338.1-201ENST00000612113 180 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 MIR6130-201ENST00000619419 109 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 AC022149.2-201ENST00000621061 203 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 AP002791.1-201ENST00000623291 381 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 AC079228.1-201ENST00000624774 1049 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 MIR4275-201ENST00000636486 87 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 AC103706.2-201ENST00000638080 240 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PDGFBP01127 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PDGFBP01127 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.18□□□□□ -1.9
PDGFBP01127 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PDGFBP01127 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PDGFBP01127 MTCO1P9-201ENST00000505577 1534 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.18□□□□□ -1.9
PDGFBP01127 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PDGFBP01127 AC005832.2-201ENST00000538921 1430 ntBASIC3.18□□□□□ -1.9
PDGFBP01127 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PDGFBP01127 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PDGFBP01127 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PDGFBP01127 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PDGFBP01127 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PDGFBP01127 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PDGFBP01127 RNU6-289P-201ENST00000364093 107 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 SNORA4.1-201ENST00000364263 144 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 RNU4-28P-201ENST00000364739 141 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PDGFBP01127 SNORD67-201ENST00000390833 111 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 RNA5SP229-201ENST00000410809 99 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PDGFBP01127 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PDGFBP01127 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.17□□□□□ -1.9
PDGFBP01127 AC006989.1-201ENST00000427212 131 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 AL590383.1-201ENST00000428602 75 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 AL356867.1-201ENST00000429623 299 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.17□□□□□ -1.9
PDGFBP01127 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.17□□□□□ -1.9
PDGFBP01127 THAP5P1-201ENST00000439089 262 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 AC016696.1-201ENST00000446949 318 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 RPL23AP35-201ENST00000451906 501 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.17□□□□□ -1.9
PDGFBP01127 snoU13.8-201ENST00000458890 104 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 AC104472.2-201ENST00000469035 601 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PDGFBP01127 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PDGFBP01127 AC026407.1-201ENST00000518369 204 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.17□□□□□ -1.9
PDGFBP01127 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PDGFBP01127 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.17□□□□□ -1.9
PDGFBP01127 OR5AP1P-201ENST00000529730 940 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PDGFBP01127 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.17□□□□□ -1.9
PDGFBP01127 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.17□□□□□ -1.9
PDGFBP01127 DNAJC8P1-201ENST00000554535 372 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.17□□□□□ -1.9
PDGFBP01127 VN1R82P-201ENST00000601481 356 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 uc_338.25-201ENST00000613756 156 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 AC091304.6-201ENST00000619761 202 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 AC007490.1-201ENST00000624321 703 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 AC097520.1-201ENST00000624435 385 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 AC017037.3-201ENST00000625016 472 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PDGFBP01127 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.17□□□□□ -1.9
PDGFBP01127 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PDGFBP01127 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.17□□□□□ -1.9
PDGFBP01127 ZNF542P-204ENST00000482727 1305 ntBASIC3.17□□□□□ -1.9
PDGFBP01127 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
PDGFBP01127 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.16□□□□□ -1.9
PDGFBP01127 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PDGFBP01127 TPTE2P4-201ENST00000258589 1605 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.16□□□□□ -1.9
PDGFBP01127 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.16□□□□□ -1.9
PDGFBP01127 AC092435.3-201ENST00000565538 3654 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 OR1S2-201ENST00000302592 978 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 RSL24D1P4-201ENST00000400938 484 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 AC126124.2-201ENST00000413542 321 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 TPMTP2-201ENST00000414372 726 ntBASIC3.16□□□□□ -1.9
PDGFBP01127 MRPL50P2-201ENST00000416821 482 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms