Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 MTND4P3-201ENST00000417829 541 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.47□□□□□ -2.01
SEMA3DO95025 RPL7P44-201ENST00000424827 742 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 GTF2IP7-202ENST00000436677 309 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.47□□□□□ -2.01
SEMA3DO95025 AC092427.1-201ENST00000439177 601 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 RAC1P7-201ENST00000445367 377 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.47□□□□□ -2.01
SEMA3DO95025 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
SEMA3DO95025 COX7A2P2-201ENST00000505291 250 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 OR5BM1P-201ENST00000512021 366 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.47□□□□□ -2.01
SEMA3DO95025 RNA5SP82-201ENST00000516707 92 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 RNA5SP471-201ENST00000516971 106 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 AC087808.1-201ENST00000520501 361 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 COX6CP8-201ENST00000522620 226 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 AP003102.1-201ENST00000525638 661 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.47□□□□□ -2.01
SEMA3DO95025 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
SEMA3DO95025 SETP7-201ENST00000552169 453 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.47□□□□□ -2.01
SEMA3DO95025 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.47□□□□□ -2.01
SEMA3DO95025 AL035413.2-201ENST00000604801 525 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 AL160281.1-201ENST00000605307 311 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 AC005332.6-201ENST00000613178 446 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 AC084824.4-201ENST00000620106 731 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 AC010872.1-201ENST00000624225 675 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.47□□□□□ -2.01
SEMA3DO95025 AC087359.1-201ENST00000508335 1740 ntBASIC2.47□□□□□ -2.01
SEMA3DO95025 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SEMA3DO95025 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SEMA3DO95025 AC107982.1-201ENST00000507171 1300 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SEMA3DO95025 RNU6-216P-201ENST00000363282 104 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 RNU6-525P-201ENST00000363685 104 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 RNU6-7-201ENST00000364784 107 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 RNU6-8-201ENST00000365467 107 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
SEMA3DO95025 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SEMA3DO95025 Y_RNA.408-201ENST00000383987 102 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 RNU6-224P-201ENST00000384055 107 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 MIR135A2-201ENST00000384854 100 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 MIR506-201ENST00000384998 124 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 MIR23A-201ENST00000385245 73 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 RNA5SP210-201ENST00000391034 120 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 AL136372.1-201ENST00000403060 228 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SEMA3DO95025 AC007064.1-201ENST00000412238 351 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 RPL7P37-201ENST00000425095 738 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 AC007742.1-201ENST00000425789 329 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.46□□□□□ -2.02
SEMA3DO95025 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.46□□□□□ -2.02
SEMA3DO95025 ELOCP26-201ENST00000436067 329 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 RNF2P1-201ENST00000442955 1010 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.46□□□□□ -2.02
SEMA3DO95025 OR6K5P-201ENST00000447050 945 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 AL109741.2-201ENST00000455561 343 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 SNORD109B-201ENST00000458961 67 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 SNORD109A-201ENST00000459128 67 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 RPS15AP17-201ENST00000470598 390 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 RPL23AP70-201ENST00000483361 460 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 AC023424.2-201ENST00000493479 777 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.46□□□□□ -2.02
SEMA3DO95025 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.46□□□□□ -2.02
SEMA3DO95025 RN7SKP132-201ENST00000516001 208 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 SNORA19.3-201ENST00000516165 130 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.46□□□□□ -2.02
SEMA3DO95025 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.46□□□□□ -2.02
SEMA3DO95025 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.46□□□□□ -2.02
SEMA3DO95025 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.46□□□□□ -2.02
SEMA3DO95025 OR4R1P-201ENST00000529879 463 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SEMA3DO95025 AP000867.2-201ENST00000532468 320 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.46□□□□□ -2.02
SEMA3DO95025 AC243972.3-201ENST00000539655 198 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SEMA3DO95025 CR383656.7-201ENST00000548164 174 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 GTF3AP2-201ENST00000557014 266 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 OR4K8P-201ENST00000578842 1048 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
SEMA3DO95025 AL158163.2-201ENST00000619110 700 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 AC004009.2-201ENST00000623016 728 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SEMA3DO95025 AC120349.2-201ENST00000625002 298 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 AP003485.1-201ENST00000625093 753 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.46□□□□□ -2.02
SEMA3DO95025 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.46□□□□□ -2.02
SEMA3DO95025 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.46□□□□□ -2.02
SEMA3DO95025 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SEMA3DO95025 PABPC1P9-201ENST00000426076 1612 ntBASIC2.46□□□□□ -2.02
SEMA3DO95025 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SEMA3DO95025 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
SEMA3DO95025 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.45□□□□□ -2.02
SEMA3DO95025 OR4G11P-202ENST00000642116 1414 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SEMA3DO95025 SNORD62.1-201ENST00000362541 86 ntBASIC2.45□□□□□ -2.02
SEMA3DO95025 RNU6-173P-201ENST00000364215 104 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms