Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 RNU1-101P-201ENST00000391171 127 ntBASIC2.89□□□□□ -1.95
MSH4O15457 ERHP2-201ENST00000402323 299 ntBASIC2.89□□□□□ -1.95
MSH4O15457 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.89□□□□□ -1.95
MSH4O15457 MTCO2P5-201ENST00000422621 426 ntBASIC2.89□□□□□ -1.95
MSH4O15457 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.89□□□□□ -1.95
MSH4O15457 AC233728.2-201ENST00000425348 757 ntBASIC2.89□□□□□ -1.95
MSH4O15457 USP9YP11-201ENST00000427537 717 ntBASIC2.89□□□□□ -1.95
MSH4O15457 SNRPEP4-201ENST00000435815 279 ntBASIC2.89□□□□□ -1.95
MSH4O15457 TRIM60P18-201ENST00000441518 828 ntBASIC2.89□□□□□ -1.95
MSH4O15457 OR6K5P-201ENST00000447050 945 ntBASIC2.89□□□□□ -1.95
MSH4O15457 RPL36AP33-201ENST00000450395 310 ntBASIC2.89□□□□□ -1.95
MSH4O15457 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.89□□□□□ -1.95
MSH4O15457 RNA5SP310-201ENST00000459084 116 ntBASIC2.89□□□□□ -1.95
MSH4O15457 AC005410.1-202ENST00000460347 485 ntBASIC2.89□□□□□ -1.95
MSH4O15457 HMGN2P13-201ENST00000476476 274 ntBASIC2.89□□□□□ -1.95
MSH4O15457 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.89□□□□□ -1.95
MSH4O15457 AC119751.4-201ENST00000507498 357 ntBASIC2.89□□□□□ -1.95
MSH4O15457 RNA5SP320-201ENST00000516263 124 ntBASIC2.89□□□□□ -1.95
MSH4O15457 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.89□□□□□ -1.95
MSH4O15457 AC128657.1-201ENST00000549459 145 ntBASIC2.89□□□□□ -1.95
MSH4O15457 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
MSH4O15457 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.89□□□□□ -1.95
MSH4O15457 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.89□□□□□ -1.95
MSH4O15457 AP005205.1-201ENST00000563503 508 ntBASIC2.89□□□□□ -1.95
MSH4O15457 AC023813.2-201ENST00000564321 469 ntBASIC2.89□□□□□ -1.95
MSH4O15457 AC234778.2-201ENST00000566241 354 ntBASIC2.89□□□□□ -1.95
MSH4O15457 AL512347.1-201ENST00000566420 503 ntBASIC2.89□□□□□ -1.95
MSH4O15457 AL390208.1-201ENST00000605885 644 ntBASIC2.89□□□□□ -1.95
MSH4O15457 AL451074.6-201ENST00000608512 729 ntBASIC2.89□□□□□ -1.95
MSH4O15457 AC004832.5-201ENST00000608677 401 ntBASIC2.89□□□□□ -1.95
MSH4O15457 AL157392.4-201ENST00000609756 345 ntBASIC2.89□□□□□ -1.95
MSH4O15457 AC002076.2-201ENST00000617362 122 ntBASIC2.89□□□□□ -1.95
MSH4O15457 AL596245.1-201ENST00000618994 362 ntBASIC2.89□□□□□ -1.95
MSH4O15457 AC231657.1-201ENST00000624313 397 ntBASIC2.89□□□□□ -1.95
MSH4O15457 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
MSH4O15457 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
MSH4O15457 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.89□□□□□ -1.95
MSH4O15457 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
MSH4O15457 AL079343.1-201ENST00000572358 1771 ntBASIC2.89□□□□□ -1.95
MSH4O15457 AL513185.3-201ENST00000433335 1300 ntBASIC2.89□□□□□ -1.95
MSH4O15457 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.89□□□□□ -1.95
MSH4O15457 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
MSH4O15457 AC110774.1-201ENST00000623567 2018 ntBASIC2.88□□□□□ -1.95
MSH4O15457 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
MSH4O15457 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
MSH4O15457 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
MSH4O15457 RPS3AP26-201ENST00000398259 784 ntBASIC2.88□□□□□ -1.95
MSH4O15457 MIR887-201ENST00000401258 79 ntBASIC2.88□□□□□ -1.95
MSH4O15457 RNU2-43P-201ENST00000410306 190 ntBASIC2.88□□□□□ -1.95
MSH4O15457 AL356320.2-201ENST00000417263 507 ntBASIC2.88□□□□□ -1.95
MSH4O15457 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.88□□□□□ -1.95
MSH4O15457 RPL7P46-201ENST00000425129 740 ntBASIC2.88□□□□□ -1.95
MSH4O15457 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.88□□□□□ -1.95
MSH4O15457 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.88□□□□□ -1.95
MSH4O15457 HSFY7P-201ENST00000432672 318 ntBASIC2.88□□□□□ -1.95
MSH4O15457 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.88□□□□□ -1.95
MSH4O15457 HSFY8P-201ENST00000437934 318 ntBASIC2.88□□□□□ -1.95
MSH4O15457 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.88□□□□□ -1.95
MSH4O15457 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.88□□□□□ -1.95
MSH4O15457 HSFY5P-201ENST00000453726 309 ntBASIC2.88□□□□□ -1.95
MSH4O15457 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.88□□□□□ -1.95
MSH4O15457 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.88□□□□□ -1.95
MSH4O15457 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.88□□□□□ -1.95
MSH4O15457 RNU7-136P-201ENST00000458819 69 ntBASIC2.88□□□□□ -1.95
MSH4O15457 AC097493.1-201ENST00000463958 372 ntBASIC2.88□□□□□ -1.95
MSH4O15457 RPL21P8-201ENST00000465083 535 ntBASIC2.88□□□□□ -1.95
MSH4O15457 MTND1P16-201ENST00000465177 898 ntBASIC2.88□□□□□ -1.95
MSH4O15457 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
MSH4O15457 RPL9P33-201ENST00000484311 566 ntBASIC2.88□□□□□ -1.95
MSH4O15457 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.88□□□□□ -1.95
MSH4O15457 AC006499.2-201ENST00000513470 337 ntBASIC2.88□□□□□ -1.95
MSH4O15457 AC093677.1-201ENST00000514414 678 ntBASIC2.88□□□□□ -1.95
MSH4O15457 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.88□□□□□ -1.95
MSH4O15457 AC123904.3-201ENST00000547218 814 ntBASIC2.88□□□□□ -1.95
MSH4O15457 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.88□□□□□ -1.95
MSH4O15457 AC090615.1-201ENST00000577519 154 ntBASIC2.88□□□□□ -1.95
MSH4O15457 AP001269.3-201ENST00000588718 329 ntBASIC2.88□□□□□ -1.95
MSH4O15457 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.88□□□□□ -1.95
MSH4O15457 AC013444.2-201ENST00000603317 787 ntBASIC2.88□□□□□ -1.95
MSH4O15457 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.88□□□□□ -1.95
MSH4O15457 AL136370.1-201ENST00000608166 691 ntBASIC2.88□□□□□ -1.95
MSH4O15457 AC009570.1-201ENST00000609599 745 ntBASIC2.88□□□□□ -1.95
MSH4O15457 DUXAP10-204ENST00000612052 616 ntBASIC2.88□□□□□ -1.95
MSH4O15457 AC005858.4-201ENST00000623191 700 ntBASIC2.88□□□□□ -1.95
MSH4O15457 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.88□□□□□ -1.95
MSH4O15457 AC243829.7-201ENST00000633081 225 ntBASIC2.88□□□□□ -1.95
MSH4O15457 LRRC77P-213ENST00000637727 880 ntBASIC2.88□□□□□ -1.95
MSH4O15457 FAM35CP-201ENST00000554755 2470 ntBASIC2.88□□□□□ -1.95
MSH4O15457 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
MSH4O15457 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
MSH4O15457 AL022578.1-201ENST00000439330 1433 ntBASIC2.87□□□□□ -1.95
MSH4O15457 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MSH4O15457 AC009812.4-201ENST00000569134 1805 ntBASIC2.87□□□□□ -1.95
MSH4O15457 RNU4-68P-201ENST00000364314 141 ntBASIC2.87□□□□□ -1.95
MSH4O15457 RNU1-100P-201ENST00000365255 165 ntBASIC2.87□□□□□ -1.95
MSH4O15457 MIR27B-201ENST00000385129 97 ntBASIC2.87□□□□□ -1.95
MSH4O15457 AL592310.1-201ENST00000414330 671 ntBASIC2.87□□□□□ -1.95
MSH4O15457 TPMTP2-201ENST00000414372 726 ntBASIC2.87□□□□□ -1.95
MSH4O15457 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
MSH4O15457 AL513175.2-201ENST00000422071 443 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms