Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
FOXN1O15353 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXN1O15353 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
FOXN1O15353 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXN1O15353 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
FOXN1O15353 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.5□□□□□ -1.69
FOXN1O15353 RNY3P3-201ENST00000363816 102 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXN1O15353 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXN1O15353 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXN1O15353 HMGB3P12-201ENST00000438745 556 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 RPL23AP20-201ENST00000447965 421 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 AC132479.1-201ENST00000449160 144 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 Z82190.1-201ENST00000454534 490 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 AL035404.1-201ENST00000497982 568 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXN1O15353 snoU109.6-201ENST00000516831 118 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.5□□□□□ -1.69
FOXN1O15353 AC105029.1-201ENST00000520250 669 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXN1O15353 AC022882.1-201ENST00000532142 501 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.5□□□□□ -1.69
FOXN1O15353 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXN1O15353 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXN1O15353 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.5□□□□□ -1.69
FOXN1O15353 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXN1O15353 AL845331.3-202ENST00000562856 261 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 MIR3682-201ENST00000581338 84 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 MIR544B-201ENST00000582372 78 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 AC018638.8-201ENST00000588755 281 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 HMGN1P30-201ENST00000589286 268 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 AC090525.3-201ENST00000605601 189 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 uc_338.9-201ENST00000617424 182 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 AC079684.1-201ENST00000621405 437 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 AC005183.1-201ENST00000603687 1979 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 MTCO1P9-201ENST00000505577 1534 ntBASIC4.5□□□□□ -1.69
FOXN1O15353 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
FOXN1O15353 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
FOXN1O15353 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXN1O15353 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.5□□□□□ -1.69
FOXN1O15353 AC119744.1-201ENST00000454746 1715 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.49□□□□□ -1.69
FOXN1O15353 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXN1O15353 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
FOXN1O15353 RNU6-738P-201ENST00000384531 106 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 MIR606-201ENST00000384851 96 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 TMSB4XP8-201ENST00000402089 135 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 LAP3P1-201ENST00000403648 294 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 RNA5SP293-201ENST00000410527 113 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 TMSB4XP6-201ENST00000415187 135 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 SPA17P1-201ENST00000416656 452 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXN1O15353 TMSB4XP1-201ENST00000424567 135 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 RPL31P35-201ENST00000431058 377 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 SKP1P1-201ENST00000438081 489 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 RPL7P54-201ENST00000438336 674 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 LSM1P1-201ENST00000438629 273 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXN1O15353 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXN1O15353 AC099563.1-201ENST00000456086 418 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 S100A11P2-201ENST00000467589 312 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 POU5F1P7-201ENST00000508759 541 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.49□□□□□ -1.69
FOXN1O15353 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXN1O15353 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.49□□□□□ -1.69
FOXN1O15353 RNU2-27P-201ENST00000516185 142 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 SNORA48.10-201ENST00000516965 160 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXN1O15353 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXN1O15353 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
FOXN1O15353 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.49□□□□□ -1.69
FOXN1O15353 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.49□□□□□ -1.69
FOXN1O15353 AC243972.3-201ENST00000539655 198 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 AC011611.1-201ENST00000552179 197 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXN1O15353 RNU1-30P-201ENST00000606575 163 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 MIR7112-201ENST00000616126 65 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 MTND4P27-201ENST00000450813 1354 ntBASIC4.49□□□□□ -1.69
FOXN1O15353 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXN1O15353 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXN1O15353 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXN1O15353 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXN1O15353 AC006378.2-201ENST00000623178 2476 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXN1O15353 RNU6-451P-201ENST00000362921 107 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 RNA5SP399-201ENST00000364003 117 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN1O15353 Y_RNA.431-201ENST00000384086 102 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 Y_RNA.481-201ENST00000384373 102 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 SNORA75.4-201ENST00000391278 119 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 OR9R1P-201ENST00000412200 877 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.48□□□□□ -1.69
FOXN1O15353 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN1O15353 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.48□□□□□ -1.69
FOXN1O15353 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXN1O15353 RPS24P8-201ENST00000431490 402 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN1O15353 GPM6BP2-201ENST00000432046 144 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms