Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RPL7P23-201ENST00000493874 747 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.95□□□□□ -1.94
PDLIM1O00151 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PDLIM1O00151 AC104685.1-201ENST00000502445 371 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 AC074250.1-201ENST00000511117 192 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.95□□□□□ -1.94
PDLIM1O00151 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.95□□□□□ -1.94
PDLIM1O00151 MED28P6-201ENST00000558776 231 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 AP005205.1-201ENST00000563503 508 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.95□□□□□ -1.94
PDLIM1O00151 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.95□□□□□ -1.94
PDLIM1O00151 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.95□□□□□ -1.94
PDLIM1O00151 AC013444.2-201ENST00000603317 787 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 AL162713.1-201ENST00000604480 262 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 AC106900.2-201ENST00000604994 317 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 AC012443.1-201ENST00000605605 231 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 MIR6076-201ENST00000617521 113 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.95□□□□□ -1.94
PDLIM1O00151 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.95□□□□□ -1.94
PDLIM1O00151 Z83843.1-201ENST00000604070 3685 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 AL513185.3-201ENST00000433335 1300 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 AC090740.1-201ENST00000623193 2262 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PDLIM1O00151 RNU6-462P-201ENST00000362659 105 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 RNU6-1207P-201ENST00000384343 107 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PDLIM1O00151 AL356421.1-201ENST00000403255 413 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.94□□□□□ -1.94
PDLIM1O00151 UBE2D3P2-201ENST00000424409 445 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 AC005300.1-201ENST00000428401 373 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.94□□□□□ -1.94
PDLIM1O00151 THAP5P1-201ENST00000439089 262 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.94□□□□□ -1.94
PDLIM1O00151 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.94□□□□□ -1.94
PDLIM1O00151 RN7SL601P-201ENST00000471221 293 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 RPL7P49-201ENST00000471402 708 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 AP000852.1-201ENST00000472460 573 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 RPL30P14-201ENST00000482744 348 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 AC111000.2-201ENST00000507775 550 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
PDLIM1O00151 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PDLIM1O00151 RNA5SP216-201ENST00000516111 123 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 SNORA31.15-201ENST00000516771 132 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.94□□□□□ -1.94
PDLIM1O00151 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.94□□□□□ -1.94
PDLIM1O00151 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PDLIM1O00151 UBTFL10-201ENST00000528532 562 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.94□□□□□ -1.94
PDLIM1O00151 AC011611.1-201ENST00000552179 197 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.94□□□□□ -1.94
PDLIM1O00151 MIR4276-201ENST00000584832 70 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 SRGNP1-201ENST00000603392 451 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 AC013244.3-201ENST00000605614 388 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 AC090186.1-201ENST00000605991 572 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.94□□□□□ -1.94
PDLIM1O00151 AC010297.1-201ENST00000623948 149 ntBASIC2.94□□□□□ -1.94
PDLIM1O00151 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PDLIM1O00151 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
PDLIM1O00151 AC011477.1-204ENST00000623416 1325 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 TAB3P1-202ENST00000452645 1634 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.93□□□□□ -1.94
PDLIM1O00151 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PDLIM1O00151 SNORD46.1-201ENST00000364139 104 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 AL136372.1-201ENST00000403060 228 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 RN7SKP220-201ENST00000410611 288 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 PIGPP2-201ENST00000411569 458 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 HMGN1P24-201ENST00000412282 298 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 TMEM167AP1-201ENST00000423409 219 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 BX119904.4-201ENST00000424402 301 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 TXNL1P1-201ENST00000429528 554 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.93□□□□□ -1.94
PDLIM1O00151 AC024082.2-201ENST00000434771 238 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 AC129850.1-201ENST00000436203 508 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 RPS29P6-201ENST00000438196 145 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.93□□□□□ -1.94
PDLIM1O00151 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.93□□□□□ -1.94
PDLIM1O00151 OR6K5P-201ENST00000447050 945 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.93□□□□□ -1.94
PDLIM1O00151 RPL21P41-201ENST00000459863 264 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 RPL30P9-201ENST00000465586 330 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.93□□□□□ -1.94
PDLIM1O00151 HMGB1P36-201ENST00000487709 576 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 AC147055.4-201ENST00000504399 745 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 SEM1P1-201ENST00000506694 209 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.93□□□□□ -1.94
PDLIM1O00151 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.93□□□□□ -1.94
PDLIM1O00151 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.93□□□□□ -1.94
PDLIM1O00151 RNU6-528P-201ENST00000516926 100 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.93□□□□□ -1.94
PDLIM1O00151 EEF1A1P37-201ENST00000522748 715 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 AP003461.1-201ENST00000528866 78 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.93□□□□□ -1.94
PDLIM1O00151 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.93□□□□□ -1.94
PDLIM1O00151 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.93□□□□□ -1.94
PDLIM1O00151 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.93□□□□□ -1.94
PDLIM1O00151 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.93□□□□□ -1.94
PDLIM1O00151 AL353997.4-201ENST00000586196 166 ntBASIC2.93□□□□□ -1.94
PDLIM1O00151 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.93□□□□□ -1.94
PDLIM1O00151 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms