Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AL109741.2-201ENST00000455561 343 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 RNU6-420P-201ENST00000458780 107 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC073901.1-201ENST00000462471 408 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC104164.3-201ENST00000467363 1258 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC116337.2-201ENST00000477662 156 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 HSPE1P6-201ENST00000479457 291 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 RPS27P27-201ENST00000498779 255 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AL359273.1-201ENST00000510918 627 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC112673.1-201ENST00000513168 575 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 RNA5SP82-201ENST00000516707 92 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC087808.1-201ENST00000520501 361 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 OR5AK1P-201ENST00000524837 922 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 DEFB108D-201ENST00000527787 222 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC024224.1-201ENST00000538284 609 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AP002770.2-201ENST00000543613 532 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 TRAV28-201ENST00000557548 323 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC090888.1-201ENST00000561335 1141 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 SULT1C2P1-202ENST00000562418 459 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 LARP7P2-201ENST00000575306 125 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 MIR3616-201ENST00000584070 92 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC097504.2-201ENST00000608088 454 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AP005137.2-201ENST00000609238 400 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC046143.2-201ENST00000609789 160 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC020658.4-201ENST00000613987 684 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC079395.3-201ENST00000615161 484 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC079597.1-201ENST00000624306 508 ntBASIC1.84□□□□□ -2.11
TRAV41A0A0B4J266 AC009812.4-201ENST00000569134 1805 ntBASIC1.84□□□□□ -2.12
TRAV41A0A0B4J266 PABPC1P9-201ENST00000426076 1612 ntBASIC1.84□□□□□ -2.12
TRAV41A0A0B4J266 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 MIR21-201ENST00000362134 72 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 RNU1-51P-201ENST00000365345 176 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 MIR144-201ENST00000384886 86 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 NPM1P10-201ENST00000398310 865 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 MTCO2P31-201ENST00000402702 684 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 MTND3P20-201ENST00000407663 186 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 RNA5SP508-201ENST00000411327 119 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 AC107081.1-201ENST00000414975 361 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 SFR1P2-201ENST00000421841 730 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 RAC1P8-201ENST00000427086 527 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 CR769767.1-201ENST00000436337 346 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 UBE2V1P13-201ENST00000436983 439 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 WASF1P1-201ENST00000447560 1131 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 RNU7-23P-201ENST00000459465 62 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 AL135752.1-201ENST00000479477 471 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 AC006390.1-201ENST00000508068 283 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 RNA5SP135-201ENST00000517019 125 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 RNA5SP402-201ENST00000517148 110 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 ARL2BPP5-201ENST00000523141 481 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 AP003122.3-201ENST00000526316 255 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 COX6CP5-201ENST00000527162 228 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 AC011611.5-201ENST00000552477 578 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 MYL12BP1-201ENST00000569826 507 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 MIR3117-201ENST00000584034 78 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 AL645944.1-201ENST00000603857 493 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 AC009159.1-201ENST00000618386 642 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 ZNF849P-201ENST00000594711 1566 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 AL022578.1-201ENST00000439330 1433 ntBASIC1.83□□□□□ -2.12
TRAV41A0A0B4J266 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 MTCO1P23-201ENST00000415223 1526 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 MIR16-2-201ENST00000362117 81 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 RNA5SP289-201ENST00000362332 137 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 RNU1-52P-201ENST00000384190 164 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 SNORA67.4-201ENST00000384688 142 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 RNU6-882P-201ENST00000391025 103 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 RNU6-932P-201ENST00000391108 106 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms