Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 TVP23BP1-201ENST00000557500 617 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 XIAPP1-201ENST00000603162 600 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 DISC2.1-201ENST00000612827 205 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 AC130324.3-201ENST00000614165 542 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 YWHAEP7-203ENST00000622054 312 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 AC112484.5-201ENST00000624189 228 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 AC112200.1-201ENST00000625015 234 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 AC004925.1-201ENST00000624256 2706 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 GABPAP-201ENST00000419271 1356 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 MTND4P29-201ENST00000503122 1372 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 MTND5P17-201ENST00000418405 1603 ntBASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDHB1Q9Y5F3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AL354685.2-201ENST00000448218 1447 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 Y_RNA.22-201ENST00000362492 102 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 Y_RNA.38-201ENST00000362617 102 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 RNY3P3-201ENST00000363816 102 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 MIR454-201ENST00000390180 115 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 MIR708-201ENST00000390708 88 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 RNU6-882P-201ENST00000391025 103 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AC068050.1-201ENST00000394891 380 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 RNA5SP118-201ENST00000410385 109 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 CYP4F29P-201ENST00000420685 446 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AL157831.1-201ENST00000426134 473 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AC006946.1-201ENST00000429106 328 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 GTF2IP20-201ENST00000431663 360 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 USP12PX-201ENST00000432383 1057 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AC090774.1-201ENST00000435925 246 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 RPS15AP9-201ENST00000439856 381 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 snoU13.22-201ENST00000459428 104 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AC008481.1-201ENST00000463278 396 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AC116562.3-201ENST00000506136 177 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AC008958.1-201ENST00000511047 682 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 RNU6-835P-201ENST00000516974 104 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AF235103.2-201ENST00000525753 346 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AC068587.5-201ENST00000528506 175 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 ARL2BPP2-201ENST00000550907 489 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AC125611.2-201ENST00000551907 647 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AC060780.3-201ENST00000589464 80 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AC010591.1-201ENST00000603941 649 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AL049634.3-201ENST00000604968 457 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 MIR6867-201ENST00000610636 67 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AL354950.2-201ENST00000617939 290 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 MIR8059-201ENST00000620427 81 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 MIR3662-201ENST00000637030 95 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 EXOC5P1-201ENST00000510543 1969 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 CASC19-280ENST00000642102 1351 ntBASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB1Q9Y5F3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 RNU6-960P-201ENST00000364056 120 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 Y_RNA.813-201ENST00000364639 102 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 Y_RNA.367-201ENST00000365544 101 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 RNU6-1074P-201ENST00000383995 104 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 RNU6-641P-201ENST00000384006 107 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 RNU6-876P-201ENST00000391295 104 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 RPL7AP73-201ENST00000413490 353 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 AL356095.1-201ENST00000417217 199 ntBASIC4.22□□□□□ -1.73
PCDHB1Q9Y5F3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms