Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 HMGB1P28-201ENST00000507778 552 ntBASIC2.87□□□□□ -1.95
CDH9Q9ULB4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.87□□□□□ -1.95
CDH9Q9ULB4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH9Q9ULB4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDH9Q9ULB4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH9Q9ULB4 MIR3162-201ENST00000581818 82 ntBASIC2.87□□□□□ -1.95
CDH9Q9ULB4 AC091057.2-201ENST00000602594 792 ntBASIC2.87□□□□□ -1.95
CDH9Q9ULB4 AC004696.1-201ENST00000614345 607 ntBASIC2.87□□□□□ -1.95
CDH9Q9ULB4 MIR6852-201ENST00000621699 66 ntBASIC2.87□□□□□ -1.95
CDH9Q9ULB4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.87□□□□□ -1.95
CDH9Q9ULB4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDH9Q9ULB4 AC109315.1-201ENST00000584143 1347 ntBASIC2.87□□□□□ -1.95
CDH9Q9ULB4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.87□□□□□ -1.95
CDH9Q9ULB4 AC092447.7-201ENST00000422212 1621 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 AL356473.1-201ENST00000406203 1408 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 AC087359.1-201ENST00000508335 1740 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDH9Q9ULB4 RNU4-51P-201ENST00000364206 140 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 AL512633.1-201ENST00000399931 655 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 RPS3AP24-201ENST00000407896 734 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 MIR1290-201ENST00000408735 78 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.86□□□□□ -1.95
CDH9Q9ULB4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.86□□□□□ -1.95
CDH9Q9ULB4 AC234781.2-201ENST00000426370 994 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 AL390023.1-201ENST00000428836 262 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 MTCYBP45-201ENST00000435243 565 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 THAP5P1-201ENST00000439089 262 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 RPL26P6-201ENST00000440913 438 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 AP000936.2-201ENST00000447151 681 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 AL109933.2-201ENST00000452651 260 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 SNORA59A-201ENST00000459326 152 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH9Q9ULB4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH9Q9ULB4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDH9Q9ULB4 AC103783.1-201ENST00000520506 373 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 CASP1P1-201ENST00000526345 212 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 AP000867.2-201ENST00000532468 320 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH9Q9ULB4 MIR3609-201ENST00000582661 80 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 DUXAP4-201ENST00000603046 613 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 RPL12P50-201ENST00000603116 116 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 NUTF2P8-201ENST00000604593 363 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH9Q9ULB4 AC090772.4-201ENST00000623599 362 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 OR1S1-201ENST00000624470 978 ntBASIC2.86□□□□□ -1.95
CDH9Q9ULB4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CDH9Q9ULB4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CDH9Q9ULB4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDH9Q9ULB4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
CDH9Q9ULB4 RNU6-1122P-201ENST00000384449 107 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 HMGB1P17-201ENST00000403495 628 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 RPL19P1-201ENST00000411635 428 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 CCDC58P2-201ENST00000417131 366 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 Z75741.2-201ENST00000417272 1167 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH9Q9ULB4 MTCO2P5-201ENST00000422621 426 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 GTF2IP3-201ENST00000433887 494 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 AC092573.2-201ENST00000434546 243 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH9Q9ULB4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH9Q9ULB4 SDCBPP1-201ENST00000440192 890 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.85□□□□□ -1.95
CDH9Q9ULB4 SNRPGP6-201ENST00000451124 220 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH9Q9ULB4 RN7SL499P-201ENST00000481141 276 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 RN7SL432P-201ENST00000484057 298 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH9Q9ULB4 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.85□□□□□ -1.95
CDH9Q9ULB4 AC017037.2-201ENST00000513850 890 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.85□□□□□ -1.95
CDH9Q9ULB4 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH9Q9ULB4 AP000857.1-201ENST00000532151 543 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 OR7K1P-201ENST00000546439 926 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.85□□□□□ -1.95
CDH9Q9ULB4 AC123767.1-202ENST00000620407 817 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 AC104985.3-201ENST00000623479 597 ntBASIC2.85□□□□□ -1.95
CDH9Q9ULB4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDH9Q9ULB4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.85□□□□□ -1.95
CDH9Q9ULB4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDH9Q9ULB4 AC005539.1-201ENST00000443768 1479 ntBASIC2.84□□□□□ -1.95
CDH9Q9ULB4 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.84□□□□□ -1.95
CDH9Q9ULB4 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDH9Q9ULB4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CDH9Q9ULB4 MIR34A-201ENST00000385130 110 ntBASIC2.84□□□□□ -1.95
CDH9Q9ULB4 AL356057.3-201ENST00000402607 340 ntBASIC2.84□□□□□ -1.95
CDH9Q9ULB4 SNORD88.1-201ENST00000408684 91 ntBASIC2.84□□□□□ -1.95
CDH9Q9ULB4 RAP1BP1-201ENST00000412709 553 ntBASIC2.84□□□□□ -1.95
CDH9Q9ULB4 ARL5AP4-201ENST00000430731 512 ntBASIC2.84□□□□□ -1.95
CDH9Q9ULB4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.84□□□□□ -1.95
CDH9Q9ULB4 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH9Q9ULB4 MTND4P6-201ENST00000438297 472 ntBASIC2.84□□□□□ -1.95
CDH9Q9ULB4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH9Q9ULB4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.84□□□□□ -1.95
CDH9Q9ULB4 AC010099.1-201ENST00000455434 375 ntBASIC2.84□□□□□ -1.95
CDH9Q9ULB4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.84□□□□□ -1.95
CDH9Q9ULB4 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH9Q9ULB4 AC098799.2-201ENST00000509466 868 ntBASIC2.84□□□□□ -1.95
CDH9Q9ULB4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.84□□□□□ -1.95
CDH9Q9ULB4 AC096725.1-201ENST00000514266 313 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms