Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MTCYBP32-201ENST00000427945 1084 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 MTCYBP45-201ENST00000435243 565 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 TPT1P14-201ENST00000448018 505 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 RPL23AP7-203ENST00000449021 469 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AL021397.1-201ENST00000451806 248 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 RPL12P25-201ENST00000455592 494 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 ATG12P2-201ENST00000456830 416 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 U8.18-201ENST00000459285 133 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC026410.2-201ENST00000460281 156 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 RPS15AP17-201ENST00000470598 390 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC025181.1-201ENST00000477507 416 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC004263.1-201ENST00000479327 332 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 RN7SL504P-201ENST00000494496 287 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC010468.3-201ENST00000508225 458 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 NRON-201ENST00000517270 370 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 CKS1BP7-201ENST00000522230 235 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC022784.5-201ENST00000522241 437 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC125611.1-201ENST00000549563 229 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 MIR3199-1-201ENST00000582434 88 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 MIR3187-201ENST00000583431 70 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 RPAP2P1-201ENST00000603626 1168 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 OR4H6P-202ENST00000603819 340 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC013562.2-201ENST00000611632 603 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AC024941.1-201ENST00000612250 334 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 AL603758.1-201ENST00000618654 241 ntBASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC1.21□□□□□ -2.22
CDC42SE1Q9NRR8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 ADAM3A-203ENST00000461344 2157 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 MIR21-201ENST00000362134 72 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 MIR323A-201ENST00000362199 86 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 RNU6-884P-201ENST00000363889 107 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 RNU6-650P-201ENST00000365658 111 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 MIR506-201ENST00000384998 124 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 MIR105-2-201ENST00000385083 81 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 UBA52P6-201ENST00000399822 382 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AL359511.1-201ENST00000402970 211 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 UBE2V1P15-201ENST00000407776 448 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC096649.2-201ENST00000416186 393 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AIMP1P2-201ENST00000425294 312 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC093106.2-201ENST00000428212 385 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC016691.1-201ENST00000441321 413 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AL500527.1-201ENST00000448532 255 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 MTND2P3-201ENST00000452458 470 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC080013.2-201ENST00000460866 323 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 RPS20P22-201ENST00000473700 357 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 NDUFB5P1-201ENST00000508134 564 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC010460.2-201ENST00000509054 677 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC006499.2-201ENST00000513470 337 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC093677.1-201ENST00000514414 678 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 MRPS5P3-201ENST00000515577 166 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 SCARNA3-201ENST00000517097 143 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 IGKV2-26-201ENST00000518305 343 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 RBM7-208ENST00000545678 867 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC087499.8-201ENST00000578406 226 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 MIR4270-201ENST00000581799 70 ntBASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC42SE1Q9NRR8 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms