Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RMST_9.1-201ENST00000619945 193 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 AC243312.2-201ENST00000623340 601 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VTA1Q9NP79 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.55□□□□□ -1.68
VTA1Q9NP79 AC106871.1-201ENST00000568324 3102 ntBASIC4.55□□□□□ -1.68
VTA1Q9NP79 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VTA1Q9NP79 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.54□□□□□ -1.68
VTA1Q9NP79 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VTA1Q9NP79 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.54□□□□□ -1.68
VTA1Q9NP79 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VTA1Q9NP79 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
VTA1Q9NP79 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VTA1Q9NP79 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.54□□□□□ -1.68
VTA1Q9NP79 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VTA1Q9NP79 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VTA1Q9NP79 RNU6-877P-201ENST00000383868 107 ntBASIC4.54□□□□□ -1.68
VTA1Q9NP79 HDGFP1-201ENST00000405943 252 ntBASIC4.54□□□□□ -1.68
VTA1Q9NP79 RPL23AP48-201ENST00000406913 488 ntBASIC4.54□□□□□ -1.68
VTA1Q9NP79 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.54□□□□□ -1.68
VTA1Q9NP79 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.54□□□□□ -1.68
VTA1Q9NP79 RWDD4P2-201ENST00000426392 563 ntBASIC4.54□□□□□ -1.68
VTA1Q9NP79 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.54□□□□□ -1.68
VTA1Q9NP79 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.54□□□□□ -1.68
VTA1Q9NP79 RPS15AP36-201ENST00000492022 382 ntBASIC4.54□□□□□ -1.68
VTA1Q9NP79 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.54□□□□□ -1.68
VTA1Q9NP79 RNU6-1281P-201ENST00000516223 105 ntBASIC4.54□□□□□ -1.68
VTA1Q9NP79 SCARNA24.1-201ENST00000516465 137 ntBASIC4.54□□□□□ -1.68
VTA1Q9NP79 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.54□□□□□ -1.68
VTA1Q9NP79 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.54□□□□□ -1.68
VTA1Q9NP79 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.54□□□□□ -1.68
VTA1Q9NP79 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.54□□□□□ -1.68
VTA1Q9NP79 AC008752.3-201ENST00000588113 712 ntBASIC4.54□□□□□ -1.68
VTA1Q9NP79 AC008739.3-201ENST00000603262 127 ntBASIC4.54□□□□□ -1.68
VTA1Q9NP79 AP000907.4-201ENST00000604143 237 ntBASIC4.54□□□□□ -1.68
VTA1Q9NP79 AC130324.3-201ENST00000614165 542 ntBASIC4.54□□□□□ -1.68
VTA1Q9NP79 uc_338.11-201ENST00000619132 160 ntBASIC4.54□□□□□ -1.68
VTA1Q9NP79 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.54□□□□□ -1.68
VTA1Q9NP79 AC099654.14-201ENST00000638599 341 ntBASIC4.54□□□□□ -1.68
VTA1Q9NP79 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.54□□□□□ -1.68
VTA1Q9NP79 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.54□□□□□ -1.68
VTA1Q9NP79 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VTA1Q9NP79 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.54□□□□□ -1.68
VTA1Q9NP79 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.54□□□□□ -1.68
VTA1Q9NP79 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VTA1Q9NP79 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
VTA1Q9NP79 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VTA1Q9NP79 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VTA1Q9NP79 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VTA1Q9NP79 Y_RNA.89-201ENST00000363031 102 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 RNU5E-8P-201ENST00000363502 116 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 SNORD35B-201ENST00000363660 87 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 RNU6-335P-201ENST00000364563 113 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 RNU6-1279P-201ENST00000383917 103 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 Y_RNA.409-201ENST00000383990 98 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 RNU6-483P-201ENST00000384088 108 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 RNU6-74P-201ENST00000384235 107 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 MIR449B-201ENST00000384995 97 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 RNA5SP44-201ENST00000410446 133 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 USP9YP6-201ENST00000413550 854 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.53□□□□□ -1.68
VTA1Q9NP79 USP12PX-201ENST00000432383 1057 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 SEPT14P3-201ENST00000439401 183 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.53□□□□□ -1.68
VTA1Q9NP79 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.53□□□□□ -1.68
VTA1Q9NP79 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.53□□□□□ -1.68
VTA1Q9NP79 AL732372.2-207ENST00000445840 183 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.53□□□□□ -1.68
VTA1Q9NP79 SEPT14P2-201ENST00000453405 183 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 RPL7L1P8-201ENST00000469911 741 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AC126389.1-201ENST00000477436 290 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.53□□□□□ -1.68
VTA1Q9NP79 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.53□□□□□ -1.68
VTA1Q9NP79 SEPT14P4-201ENST00000513445 186 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AC105417.1-201ENST00000514691 285 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 SNORD27.1-201ENST00000516319 72 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 FO082796.1-201ENST00000523795 183 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AP004371.1-201ENST00000525240 214 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.53□□□□□ -1.68
VTA1Q9NP79 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.53□□□□□ -1.68
VTA1Q9NP79 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.53□□□□□ -1.68
VTA1Q9NP79 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.53□□□□□ -1.68
VTA1Q9NP79 MIR548S-201ENST00000581352 82 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AL670379.6-201ENST00000603753 252 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AC025449.1-201ENST00000603896 529 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AL670379.11-201ENST00000604059 253 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AC008162.1-201ENST00000604718 254 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AL670379.1-201ENST00000604752 252 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AL670379.5-201ENST00000605253 252 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AL670379.12-201ENST00000605291 253 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AL670379.8-201ENST00000605353 252 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AL670379.7-201ENST00000605823 252 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AC004067.1-201ENST00000608733 700 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AC093788.1-201ENST00000609356 927 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 AL121772.2-201ENST00000614331 297 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 FP236240.3-201ENST00000623061 327 ntBASIC4.53□□□□□ -1.68
VTA1Q9NP79 FER-210ENST00000628534 558 ntTSL 5 BASIC4.53□□□□□ -1.68
VTA1Q9NP79 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms