Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AL445567.2-201ENST00000618935 498 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC005086.4-201ENST00000623065 213 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC000123.2-201ENST00000623124 461 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 CR381572.1-201ENST00000625098 102 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC087190.4-201ENST00000574616 8334 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AP004289.2-201ENST00000444413 1457 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 AC092125.1-201ENST00000562568 1995 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 Y_RNA.28-201ENST00000362554 111 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU6-853P-201ENST00000364306 107 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 Y_RNA.301-201ENST00000364990 103 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU6-744P-201ENST00000365557 107 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU6-1279P-201ENST00000383917 103 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU6-1316P-201ENST00000384242 108 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 SNORA70C-201ENST00000384538 135 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 SNORD96B-201ENST00000386148 79 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 MIR708-201ENST00000390708 88 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 RPS26P8-201ENST00000393490 348 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 AC097374.1-203ENST00000400783 485 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 MIR548F5-201ENST00000408421 86 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU6-370P-201ENST00000411008 104 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 TPMTP2-201ENST00000414372 726 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 RPS12P5-201ENST00000423449 371 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 RPL23AP38-201ENST00000423801 469 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 AL138785.1-201ENST00000425821 331 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 RPL7L1P10-201ENST00000427790 463 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 AC010881.1-201ENST00000433830 235 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 AL356276.2-201ENST00000435919 558 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 AL137792.2-201ENST00000443484 235 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 RPS20P32-201ENST00000456044 356 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU7-152P-201ENST00000458982 64 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 AC010469.1-201ENST00000463864 576 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 RPL23AP71-201ENST00000470966 469 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 RN7SL691P-201ENST00000494487 301 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 MTCO2P24-201ENST00000515611 426 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 RNA5SP49-201ENST00000516450 115 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 Y_RNA.682-201ENST00000516457 100 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 AC022634.1-201ENST00000520765 532 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 OR4R1P-201ENST00000529879 463 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 TRAV8-5-201ENST00000537369 341 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 TOMM20P2-201ENST00000540082 421 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 TVP23BP1-201ENST00000557500 617 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 MIR4680-201ENST00000580906 66 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 MIR3942-201ENST00000585264 109 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 BBIP1P1-201ENST00000602999 279 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 ARF4P1-201ENST00000605447 541 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 OR6R2P-201ENST00000609216 300 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 MIR8059-201ENST00000620427 81 ntBASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDK5RAP1Q96SZ6 AL139811.1-201ENST00000424779 2299 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 AL672167.1-203ENST00000641299 2975 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU1-14P-201ENST00000362759 152 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 Y_RNA.339-201ENST00000365325 102 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU6-108P-201ENST00000365558 107 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 SNORD37.1-201ENST00000390968 65 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 RPL31P52-201ENST00000407532 367 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 AC127526.1-201ENST00000417526 366 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 RPS15AP12-201ENST00000419498 388 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 AC092832.1-201ENST00000422934 400 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 RSL24D1P6-201ENST00000426934 401 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 ERLEC1P1-201ENST00000433806 578 ntBASIC4.48□□□□□ -1.69
CDK5RAP1Q96SZ6 AC119618.1-201ENST00000434191 222 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms