Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC17Q96LX7 RNU6-853P-201ENST00000364306 107 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 Y_RNA.409-201ENST00000383990 98 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 RNU6-761P-201ENST00000384148 107 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 SSXP10-201ENST00000402595 565 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 RNA5SP39-201ENST00000411245 120 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC17Q96LX7 RPL31P45-201ENST00000419532 356 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 PIGFP2-201ENST00000421400 651 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 PSMA6P3-201ENST00000428242 164 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC17Q96LX7 AC000111.3-201ENST00000433478 193 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 RPL21P10-201ENST00000463521 490 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 RN7SL601P-201ENST00000471221 293 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 RBM43P1-201ENST00000476891 1081 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 AP001025.2-201ENST00000490908 477 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 AC069439.1-201ENST00000494739 167 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 HSPD1P15-201ENST00000505573 1122 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 PRDX4P1-201ENST00000507189 574 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 RNU6-714P-201ENST00000516963 103 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 RNU6-201P-201ENST00000517100 61 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC17Q96LX7 AC011611.1-201ENST00000552179 197 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 AC007424.1-203ENST00000554613 687 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC17Q96LX7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC17Q96LX7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC17Q96LX7 AL359999.1-201ENST00000604513 294 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 AL357078.3-201ENST00000607528 618 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 RNU6-87P-201ENST00000607561 108 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 AC004067.1-201ENST00000608733 700 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 AC009318.4-201ENST00000620496 486 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 AL359880.1-201ENST00000621879 266 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 AL008636.1-201ENST00000625038 1018 ntBASIC4.11□□□□□ -1.75
CCDC17Q96LX7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
CCDC17Q96LX7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CCDC17Q96LX7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 Y_RNA.9-201ENST00000362354 101 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 RNU6-28P-201ENST00000362378 107 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 RNU6-1090P-201ENST00000364065 94 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 Y_RNA.548-201ENST00000384656 105 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 MIR1277-201ENST00000408536 78 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 NUP35P2-201ENST00000416748 943 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 RPL31P35-201ENST00000431058 377 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AC104850.1-201ENST00000435940 476 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 MTATP6P30-201ENST00000443540 664 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AP001992.1-205ENST00000462248 379 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 RN7SL93P-201ENST00000463035 293 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AC010683.1-201ENST00000473673 378 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AC104563.1-201ENST00000476147 376 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AC093663.1-201ENST00000497190 394 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 Y_RNA.672-201ENST00000516289 104 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 IGKV2-26-201ENST00000518305 343 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 IGLVIV-53-201ENST00000520107 367 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 OR5AQ1P-201ENST00000527596 927 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AC092470.1-201ENST00000546187 132 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 MIR3682-201ENST00000581338 84 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 MIR3118-1-201ENST00000581787 76 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 DUXAP4-201ENST00000603046 613 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AC009159.1-201ENST00000618386 642 ntBASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC17Q96LX7 AL356274.2-201ENST00000624379 3752 ntBASIC4.09□□□□□ -1.75
CCDC17Q96LX7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC17Q96LX7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCDC17Q96LX7 RNY4P14-201ENST00000363656 96 ntBASIC4.09□□□□□ -1.75
CCDC17Q96LX7 RNU6-282P-201ENST00000365357 103 ntBASIC4.09□□□□□ -1.75
CCDC17Q96LX7 RNU6-730P-201ENST00000383954 104 ntBASIC4.09□□□□□ -1.75
CCDC17Q96LX7 RNU6-1103P-201ENST00000384150 107 ntBASIC4.09□□□□□ -1.75
CCDC17Q96LX7 SNORA9-201ENST00000384215 133 ntBASIC4.09□□□□□ -1.75
CCDC17Q96LX7 Y_RNA.453-201ENST00000384223 109 ntBASIC4.09□□□□□ -1.75
CCDC17Q96LX7 RNU4-55P-201ENST00000410731 137 ntBASIC4.09□□□□□ -1.75
CCDC17Q96LX7 AC012065.2-201ENST00000421295 375 ntBASIC4.09□□□□□ -1.75
CCDC17Q96LX7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC17Q96LX7 AC233728.2-201ENST00000425348 757 ntBASIC4.09□□□□□ -1.75
CCDC17Q96LX7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC17Q96LX7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC17Q96LX7 MTCO2P11-201ENST00000431069 680 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms