Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC080013.4-201ENST00000607624 649 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 AP000238.1-201ENST00000608759 426 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 AC008498.1-201ENST00000613012 531 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SNED1Q8TER0 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNED1Q8TER0 AP005901.5-201ENST00000545779 1796 ntBASIC3.56□□□□□ -1.84
SNED1Q8TER0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNED1Q8TER0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SNED1Q8TER0 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNED1Q8TER0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SNED1Q8TER0 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.56□□□□□ -1.84
SNED1Q8TER0 AC004520.1-201ENST00000608362 1413 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SNED1Q8TER0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 AC092447.7-201ENST00000422212 1621 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 RNU6-1283P-201ENST00000365314 105 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SNED1Q8TER0 OR1L1-202ENST00000373686 1083 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 RN7SKP285-201ENST00000410137 318 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 MTND1P21-201ENST00000412991 285 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 NUP35P2-201ENST00000416748 943 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 Z99497.1-201ENST00000421282 135 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 USP9YP29-201ENST00000445112 563 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 RPL29P29-201ENST00000448725 423 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 NIPA2P5-201ENST00000452282 464 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 ZNF114P1-201ENST00000453500 292 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 AC116337.2-201ENST00000477662 156 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 AC147055.4-201ENST00000504399 745 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 AC104108.1-201ENST00000509930 412 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 AC023632.1-201ENST00000518463 375 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 AP003392.2-201ENST00000527269 208 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 AP001317.1-201ENST00000531194 960 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 AC016957.1-201ENST00000534895 309 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SNED1Q8TER0 AC107016.2-201ENST00000547968 190 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 AC018714.1-201ENST00000605028 208 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 AL592221.1-201ENST00000605266 382 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 SEPT14P19-203ENST00000633205 211 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 ELL2P4-201ENST00000446870 1376 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 MTND5P3-201ENST00000438536 1800 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 SEC63P2-201ENST00000503863 1939 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 AC046144.1-201ENST00000478559 1853 ntBASIC3.55□□□□□ -1.84
SNED1Q8TER0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SNED1Q8TER0 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.54□□□□□ -1.84
SNED1Q8TER0 SNORA51.12-201ENST00000384448 134 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 MIR525-201ENST00000384978 85 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 MIR9-1-201ENST00000385198 89 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 TPMTP3-201ENST00000411928 735 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 AMD1P2-201ENST00000412936 992 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 MTCO1P3-201ENST00000429327 192 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 RPL36AP33-201ENST00000450395 310 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 RPL37P6-202ENST00000464216 403 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.54□□□□□ -1.84
SNED1Q8TER0 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.54□□□□□ -1.84
SNED1Q8TER0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
SNED1Q8TER0 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.54□□□□□ -1.84
SNED1Q8TER0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.54□□□□□ -1.84
SNED1Q8TER0 AC109464.2-201ENST00000510242 943 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 AC079395.1-201ENST00000510981 262 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 AC109445.1-201ENST00000512356 383 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 RNU6-405P-201ENST00000516637 110 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.54□□□□□ -1.84
SNED1Q8TER0 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.54□□□□□ -1.84
SNED1Q8TER0 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.54□□□□□ -1.84
SNED1Q8TER0 AC012414.6-201ENST00000568241 401 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.54□□□□□ -1.84
SNED1Q8TER0 BDH2P1-201ENST00000602288 736 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 AC025946.2-201ENST00000603398 234 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 AL035413.2-201ENST00000604801 525 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 AC113194.1-201ENST00000606037 500 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 AC068722.2-201ENST00000618734 544 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 U7.8-201ENST00000619968 63 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 PCMTD1P7-201ENST00000634506 357 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 AC116618.1-201ENST00000634617 774 ntBASIC3.54□□□□□ -1.84
SNED1Q8TER0 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.54□□□□□ -1.84
SNED1Q8TER0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SNED1Q8TER0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.54□□□□□ -1.84
SNED1Q8TER0 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SNED1Q8TER0 AC007336.1-201ENST00000576365 3828 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms