Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AL357094.1-201ENST00000603845 844 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AC106791.2-201ENST00000604680 391 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AC018638.7-201ENST00000605836 1114 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AL360219.1-201ENST00000610230 366 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AL590282.1-201ENST00000610379 1136 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AL607023.1-201ENST00000620045 248 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AC006386.2-201ENST00000624491 75 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AC012005.1-201ENST00000624575 75 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RFWD3Q6PCD5 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 RNU6-989P-201ENST00000362756 107 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 DHFRP6-201ENST00000401776 268 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AL356131.1-201ENST00000405826 414 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AC006548.1-201ENST00000427470 102 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AL035407.1-201ENST00000429211 571 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 RPL23AP35-201ENST00000451906 501 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 HMGB1P15-201ENST00000453854 435 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 RPS20P24-201ENST00000457473 361 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 RNU7-136P-201ENST00000458819 69 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 RPS29P26-201ENST00000477483 171 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 MRPS33P3-201ENST00000513456 322 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 GMPSP1-201ENST00000514075 579 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 RNU1-61P-201ENST00000516107 151 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 MTND2P38-201ENST00000522536 667 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AL596327.1-201ENST00000603629 213 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AC025811.1-201ENST00000604312 472 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AC079228.1-201ENST00000624774 1049 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 CR381572.1-201ENST00000625098 102 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AL137790.1-201ENST00000634283 177 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 MIR6733-201ENST00000635723 61 ntBASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RFWD3Q6PCD5 AC000403.1-201ENST00000613696 3585 ntBASIC3.09□□□□□ -1.92
RFWD3Q6PCD5 AC093010.3-201ENST00000570269 15214 ntBASIC3.09□□□□□ -1.92
RFWD3Q6PCD5 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.09□□□□□ -1.92
RFWD3Q6PCD5 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RFWD3Q6PCD5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RFWD3Q6PCD5 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RFWD3Q6PCD5 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.09□□□□□ -1.92
RFWD3Q6PCD5 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
RFWD3Q6PCD5 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 AL365361.1-201ENST00000566942 3481 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 RNU6-263P-201ENST00000363811 107 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 RNU6-821P-201ENST00000390995 107 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 U3.29-201ENST00000391296 212 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 AC011233.1-201ENST00000422812 283 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 AL593851.1-201ENST00000426171 157 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 ZYG11AP1-201ENST00000430329 837 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 SUMO2P2-201ENST00000456482 255 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 RPL21P41-201ENST00000459863 264 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 SYPL1P1-201ENST00000473622 768 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 AL024509.2-201ENST00000493462 493 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 AC104685.1-201ENST00000502445 371 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 HSPE1P23-201ENST00000509838 286 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 RNU6-150P-201ENST00000516237 95 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 RN7SKP282-201ENST00000516824 299 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 AC022861.1-201ENST00000522981 663 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 EIF4BP1-201ENST00000554881 351 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 AL133507.1-201ENST00000605269 557 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 AC006329.2-201ENST00000611491 394 ntBASIC3.08□□□□□ -1.92
RFWD3Q6PCD5 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms