Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC090772.4-201ENST00000623599 362 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
RFX4Q33E94 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.59□□□□□ -1.99
RFX4Q33E94 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
RFX4Q33E94 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.59□□□□□ -2
RFX4Q33E94 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
RFX4Q33E94 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RFX4Q33E94 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
RFX4Q33E94 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.58□□□□□ -2
RFX4Q33E94 AC097714.1-201ENST00000511272 1647 ntBASIC2.58□□□□□ -2
RFX4Q33E94 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.58□□□□□ -2
RFX4Q33E94 Y_RNA.465-201ENST00000384293 102 ntBASIC2.58□□□□□ -2
RFX4Q33E94 RNU6-636P-201ENST00000384598 107 ntBASIC2.58□□□□□ -2
RFX4Q33E94 RNU6-952P-201ENST00000391164 108 ntBASIC2.58□□□□□ -2
RFX4Q33E94 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.58□□□□□ -2
RFX4Q33E94 ELOCP9-201ENST00000418624 239 ntBASIC2.58□□□□□ -2
RFX4Q33E94 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.58□□□□□ -2
RFX4Q33E94 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.58□□□□□ -2
RFX4Q33E94 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.58□□□□□ -2
RFX4Q33E94 AL451062.2-201ENST00000427515 271 ntBASIC2.58□□□□□ -2
RFX4Q33E94 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.58□□□□□ -2
RFX4Q33E94 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.58□□□□□ -2
RFX4Q33E94 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.58□□□□□ -2
RFX4Q33E94 RPL30P14-201ENST00000482744 348 ntBASIC2.58□□□□□ -2
RFX4Q33E94 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.58□□□□□ -2
RFX4Q33E94 GTF2IP9-201ENST00000502460 301 ntBASIC2.58□□□□□ -2
RFX4Q33E94 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.58□□□□□ -2
RFX4Q33E94 DSTNP2-201ENST00000504533 515 ntBASIC2.58□□□□□ -2
RFX4Q33E94 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.58□□□□□ -2
RFX4Q33E94 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.58□□□□□ -2
RFX4Q33E94 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.58□□□□□ -2
RFX4Q33E94 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.58□□□□□ -2
RFX4Q33E94 AC116353.3-201ENST00000511215 249 ntBASIC2.58□□□□□ -2
RFX4Q33E94 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.58□□□□□ -2
RFX4Q33E94 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.58□□□□□ -2
RFX4Q33E94 AC009812.2-201ENST00000517657 457 ntBASIC2.58□□□□□ -2
RFX4Q33E94 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.58□□□□□ -2
RFX4Q33E94 AC022861.1-201ENST00000522981 663 ntBASIC2.58□□□□□ -2
RFX4Q33E94 CYCSP2-201ENST00000558168 301 ntBASIC2.58□□□□□ -2
RFX4Q33E94 AL512347.1-201ENST00000566420 503 ntBASIC2.58□□□□□ -2
RFX4Q33E94 OR4K8P-201ENST00000578842 1048 ntBASIC2.58□□□□□ -2
RFX4Q33E94 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.58□□□□□ -2
RFX4Q33E94 ZNF861P-201ENST00000588126 639 ntBASIC2.58□□□□□ -2
RFX4Q33E94 GLUD1P4-201ENST00000590914 418 ntBASIC2.58□□□□□ -2
RFX4Q33E94 AC020895.1-201ENST00000595362 272 ntBASIC2.58□□□□□ -2
RFX4Q33E94 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.58□□□□□ -2
RFX4Q33E94 AC004853.1-201ENST00000604902 698 ntBASIC2.58□□□□□ -2
RFX4Q33E94 YPEL5P2-201ENST00000605553 359 ntBASIC2.58□□□□□ -2
RFX4Q33E94 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.58□□□□□ -2
RFX4Q33E94 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.58□□□□□ -2
RFX4Q33E94 AL022578.1-201ENST00000439330 1433 ntBASIC2.58□□□□□ -2
RFX4Q33E94 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.58□□□□□ -2
RFX4Q33E94 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
RFX4Q33E94 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
RFX4Q33E94 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.57□□□□□ -2
RFX4Q33E94 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
RFX4Q33E94 MIR6073-201ENST00000352083 89 ntBASIC2.57□□□□□ -2
RFX4Q33E94 SNORA25.6-201ENST00000364121 118 ntBASIC2.57□□□□□ -2
RFX4Q33E94 Y_RNA.311-201ENST00000365068 96 ntBASIC2.57□□□□□ -2
RFX4Q33E94 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.57□□□□□ -2
RFX4Q33E94 RPS4XP3-201ENST00000398541 413 ntBASIC2.57□□□□□ -2
RFX4Q33E94 FAT1P1-201ENST00000406588 507 ntBASIC2.57□□□□□ -2
RFX4Q33E94 AL645937.1-202ENST00000421799 937 ntBASIC2.57□□□□□ -2
RFX4Q33E94 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.57□□□□□ -2
RFX4Q33E94 COX7BP2-201ENST00000437976 242 ntBASIC2.57□□□□□ -2
RFX4Q33E94 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.57□□□□□ -2
RFX4Q33E94 PTENP1-201ENST00000447117 1215 ntBASIC2.57□□□□□ -2
RFX4Q33E94 RPL37P4-201ENST00000448908 268 ntBASIC2.57□□□□□ -2
RFX4Q33E94 BX510359.1-201ENST00000456973 237 ntBASIC2.57□□□□□ -2
RFX4Q33E94 AC097493.1-201ENST00000463958 372 ntBASIC2.57□□□□□ -2
RFX4Q33E94 MTND1P16-201ENST00000465177 898 ntBASIC2.57□□□□□ -2
RFX4Q33E94 RPL31P50-201ENST00000471002 296 ntBASIC2.57□□□□□ -2
RFX4Q33E94 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.57□□□□□ -2
RFX4Q33E94 CBX3P3-201ENST00000508108 532 ntBASIC2.57□□□□□ -2
RFX4Q33E94 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.57□□□□□ -2
RFX4Q33E94 MTND5P4-201ENST00000514978 288 ntBASIC2.57□□□□□ -2
RFX4Q33E94 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.57□□□□□ -2
RFX4Q33E94 DEFB131D-201ENST00000526803 184 ntBASIC2.57□□□□□ -2
RFX4Q33E94 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.57□□□□□ -2
RFX4Q33E94 CR383656.7-201ENST00000548164 174 ntBASIC2.57□□□□□ -2
RFX4Q33E94 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.57□□□□□ -2
RFX4Q33E94 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.57□□□□□ -2
RFX4Q33E94 AC008277.2-201ENST00000605196 797 ntBASIC2.57□□□□□ -2
RFX4Q33E94 AC080013.4-201ENST00000607624 649 ntBASIC2.57□□□□□ -2
RFX4Q33E94 AC027449.1-201ENST00000608890 407 ntBASIC2.57□□□□□ -2
RFX4Q33E94 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.57□□□□□ -2
RFX4Q33E94 AL596245.1-201ENST00000618994 362 ntBASIC2.57□□□□□ -2
RFX4Q33E94 AC109809.1-201ENST00000619665 545 ntBASIC2.57□□□□□ -2
RFX4Q33E94 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.57□□□□□ -2
RFX4Q33E94 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.57□□□□□ -2
RFX4Q33E94 MIR3651-201ENST00000630427 90 ntBASIC2.57□□□□□ -2
RFX4Q33E94 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.57□□□□□ -2
RFX4Q33E94 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
RFX4Q33E94 AC099786.3-201ENST00000565735 1410 ntBASIC2.57□□□□□ -2
RFX4Q33E94 OR4G11P-202ENST00000642116 1414 ntBASIC2.57□□□□□ -2
RFX4Q33E94 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.57□□□□□ -2
RFX4Q33E94 AC138915.1-201ENST00000565427 1685 ntBASIC2.57□□□□□ -2
RFX4Q33E94 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
RFX4Q33E94 FO393413.1-201ENST00000402892 195 ntBASIC2.56□□□□□ -2
RFX4Q33E94 AL139095.1-201ENST00000404326 391 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms