Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.21□□□□□ -1.9
VCPP55072 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.21□□□□□ -1.9
VCPP55072 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.21□□□□□ -1.9
VCPP55072 AC110760.3-202ENST00000515177 371 ntBASIC3.21□□□□□ -1.9
VCPP55072 RNA5SP385-201ENST00000515947 110 ntBASIC3.21□□□□□ -1.9
VCPP55072 RNU6-311P-201ENST00000516224 102 ntBASIC3.21□□□□□ -1.9
VCPP55072 AC022662.1-201ENST00000580252 331 ntBASIC3.21□□□□□ -1.9
VCPP55072 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.21□□□□□ -1.9
VCPP55072 MIR4506-201ENST00000584693 77 ntBASIC3.21□□□□□ -1.9
VCPP55072 BNIP3P24-201ENST00000593398 557 ntBASIC3.21□□□□□ -1.9
VCPP55072 MIR1322-201ENST00000638013 71 ntBASIC3.21□□□□□ -1.9
VCPP55072 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.21□□□□□ -1.9
VCPP55072 FAM35BP-202ENST00000497389 3337 ntBASIC3.21□□□□□ -1.9
VCPP55072 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VCPP55072 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
VCPP55072 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.2□□□□□ -1.9
VCPP55072 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VCPP55072 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
VCPP55072 SNORA70B-201ENST00000384210 135 ntBASIC3.2□□□□□ -1.9
VCPP55072 MIR504-201ENST00000385065 83 ntBASIC3.2□□□□□ -1.9
VCPP55072 ANAPC10P1-201ENST00000395991 556 ntBASIC3.2□□□□□ -1.9
VCPP55072 AC110754.1-201ENST00000399740 601 ntBASIC3.2□□□□□ -1.9
VCPP55072 FAT1P1-201ENST00000406588 507 ntBASIC3.2□□□□□ -1.9
VCPP55072 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.2□□□□□ -1.9
VCPP55072 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.2□□□□□ -1.9
VCPP55072 AC244505.4-201ENST00000434905 287 ntBASIC3.2□□□□□ -1.9
VCPP55072 Z80107.1-201ENST00000436830 412 ntBASIC3.2□□□□□ -1.9
VCPP55072 HMGB1P18-201ENST00000438801 619 ntBASIC3.2□□□□□ -1.9
VCPP55072 SSXP5-201ENST00000443473 287 ntBASIC3.2□□□□□ -1.9
VCPP55072 USP9YP25-201ENST00000457708 443 ntBASIC3.2□□□□□ -1.9
VCPP55072 RPS15AP17-201ENST00000470598 390 ntBASIC3.2□□□□□ -1.9
VCPP55072 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.2□□□□□ -1.9
VCPP55072 AC118282.1-201ENST00000506408 765 ntBASIC3.2□□□□□ -1.9
VCPP55072 CBX3P3-201ENST00000508108 532 ntBASIC3.2□□□□□ -1.9
VCPP55072 AC079395.1-201ENST00000510981 262 ntBASIC3.2□□□□□ -1.9
VCPP55072 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.2□□□□□ -1.9
VCPP55072 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.2□□□□□ -1.9
VCPP55072 AC104986.1-201ENST00000517978 436 ntBASIC3.2□□□□□ -1.9
VCPP55072 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.2□□□□□ -1.9
VCPP55072 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.2□□□□□ -1.9
VCPP55072 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.2□□□□□ -1.9
VCPP55072 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VCPP55072 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.2□□□□□ -1.9
VCPP55072 EEF1B2P4-201ENST00000551398 348 ntBASIC3.2□□□□□ -1.9
VCPP55072 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.2□□□□□ -1.9
VCPP55072 AGGF1P5-201ENST00000567900 919 ntBASIC3.2□□□□□ -1.9
VCPP55072 OR4K7P-201ENST00000580232 945 ntBASIC3.2□□□□□ -1.9
VCPP55072 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VCPP55072 MIR4637-201ENST00000582405 84 ntBASIC3.2□□□□□ -1.9
VCPP55072 AC245036.5-201ENST00000596330 847 ntBASIC3.2□□□□□ -1.9
VCPP55072 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.2□□□□□ -1.9
VCPP55072 AL035413.2-201ENST00000604801 525 ntBASIC3.2□□□□□ -1.9
VCPP55072 AC006386.1-201ENST00000619436 415 ntBASIC3.2□□□□□ -1.9
VCPP55072 AC013470.4-201ENST00000619978 986 ntBASIC3.2□□□□□ -1.9
VCPP55072 AC090617.7-201ENST00000623952 126 ntBASIC3.2□□□□□ -1.9
VCPP55072 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.2□□□□□ -1.9
VCPP55072 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VCPP55072 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.2□□□□□ -1.9
VCPP55072 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.2□□□□□ -1.9
VCPP55072 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.2□□□□□ -1.9
VCPP55072 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.19□□□□□ -1.9
VCPP55072 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VCPP55072 CUL1P1-201ENST00000509510 2425 ntBASIC3.19□□□□□ -1.9
VCPP55072 XGY1-201ENST00000381172 446 ntBASIC3.19□□□□□ -1.9
VCPP55072 RNU6-1122P-201ENST00000384449 107 ntBASIC3.19□□□□□ -1.9
VCPP55072 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.19□□□□□ -1.9
VCPP55072 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.19□□□□□ -1.9
VCPP55072 MTND4LP10-201ENST00000435146 291 ntBASIC3.19□□□□□ -1.9
VCPP55072 SETP8-201ENST00000435341 628 ntBASIC3.19□□□□□ -1.9
VCPP55072 RPL23AP74-201ENST00000437246 471 ntBASIC3.19□□□□□ -1.9
VCPP55072 CR769776.1-201ENST00000441254 787 ntBASIC3.19□□□□□ -1.9
VCPP55072 GAPDHP27-201ENST00000447427 1020 ntBASIC3.19□□□□□ -1.9
VCPP55072 TRGVB-201ENST00000453257 471 ntBASIC3.19□□□□□ -1.9
VCPP55072 RPL21P134-201ENST00000453468 483 ntBASIC3.19□□□□□ -1.9
VCPP55072 USP9YP34-201ENST00000453983 808 ntBASIC3.19□□□□□ -1.9
VCPP55072 RPL18AP17-201ENST00000455326 198 ntBASIC3.19□□□□□ -1.9
VCPP55072 RPL30P14-201ENST00000482744 348 ntBASIC3.19□□□□□ -1.9
VCPP55072 RN7SL20P-201ENST00000488827 297 ntBASIC3.19□□□□□ -1.9
VCPP55072 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.19□□□□□ -1.9
VCPP55072 AC020699.1-201ENST00000505161 445 ntBASIC3.19□□□□□ -1.9
VCPP55072 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.19□□□□□ -1.9
VCPP55072 AC116353.3-201ENST00000511215 249 ntBASIC3.19□□□□□ -1.9
VCPP55072 AC109445.1-201ENST00000512356 383 ntBASIC3.19□□□□□ -1.9
VCPP55072 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.19□□□□□ -1.9
VCPP55072 RNU6-583P-201ENST00000516012 92 ntBASIC3.19□□□□□ -1.9
VCPP55072 RNU6-27P-201ENST00000516146 107 ntBASIC3.19□□□□□ -1.9
VCPP55072 RN7SKP43-201ENST00000516173 320 ntBASIC3.19□□□□□ -1.9
VCPP55072 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.19□□□□□ -1.9
VCPP55072 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.19□□□□□ -1.9
VCPP55072 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.19□□□□□ -1.9
VCPP55072 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.19□□□□□ -1.9
VCPP55072 HSPE1P3-201ENST00000559254 309 ntBASIC3.19□□□□□ -1.9
VCPP55072 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.19□□□□□ -1.9
VCPP55072 MIR4760-201ENST00000585040 80 ntBASIC3.19□□□□□ -1.9
VCPP55072 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.19□□□□□ -1.9
VCPP55072 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.19□□□□□ -1.9
VCPP55072 AC131235.4-201ENST00000609288 620 ntBASIC3.19□□□□□ -1.9
VCPP55072 AC243773.3-201ENST00000613270 256 ntBASIC3.19□□□□□ -1.9
VCPP55072 MIR6076-201ENST00000617521 113 ntBASIC3.19□□□□□ -1.9
VCPP55072 AL353748.2-201ENST00000622148 471 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms