Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 KCTD9P5-201ENST00000504141 1170 ntBASIC4.1□□□□□ -1.75
NEK3P51956 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.1□□□□□ -1.75
NEK3P51956 AC114797.1-201ENST00000514003 728 ntBASIC4.1□□□□□ -1.75
NEK3P51956 SNORA70.14-201ENST00000516205 110 ntBASIC4.1□□□□□ -1.75
NEK3P51956 RNU7-51P-201ENST00000516560 62 ntBASIC4.1□□□□□ -1.75
NEK3P51956 RNU7-143P-201ENST00000516781 65 ntBASIC4.1□□□□□ -1.75
NEK3P51956 RN7SKP258-201ENST00000517151 304 ntBASIC4.1□□□□□ -1.75
NEK3P51956 AP003072.2-201ENST00000527756 676 ntBASIC4.1□□□□□ -1.75
NEK3P51956 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.1□□□□□ -1.75
NEK3P51956 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.1□□□□□ -1.75
NEK3P51956 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.1□□□□□ -1.75
NEK3P51956 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.1□□□□□ -1.75
NEK3P51956 GNRHR2P1-201ENST00000555315 631 ntBASIC4.1□□□□□ -1.75
NEK3P51956 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.1□□□□□ -1.75
NEK3P51956 AC005951.2-201ENST00000576282 495 ntBASIC4.1□□□□□ -1.75
NEK3P51956 AC053481.4-201ENST00000583164 216 ntBASIC4.1□□□□□ -1.75
NEK3P51956 BNIP3P33-201ENST00000598912 569 ntBASIC4.1□□□□□ -1.75
NEK3P51956 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
NEK3P51956 AC244100.1-202ENST00000621554 382 ntBASIC4.1□□□□□ -1.75
NEK3P51956 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.1□□□□□ -1.75
NEK3P51956 AC110994.2-201ENST00000635481 492 ntBASIC4.1□□□□□ -1.75
NEK3P51956 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.1□□□□□ -1.75
NEK3P51956 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.1□□□□□ -1.75
NEK3P51956 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NEK3P51956 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
NEK3P51956 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NEK3P51956 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
NEK3P51956 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.09□□□□□ -1.75
NEK3P51956 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NEK3P51956 RNU6-741P-201ENST00000383889 107 ntBASIC4.09□□□□□ -1.75
NEK3P51956 RPS3AP36-201ENST00000398190 775 ntBASIC4.09□□□□□ -1.75
NEK3P51956 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.09□□□□□ -1.75
NEK3P51956 AC127391.1-201ENST00000411737 98 ntBASIC4.09□□□□□ -1.75
NEK3P51956 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.09□□□□□ -1.75
NEK3P51956 AC016907.1-201ENST00000419483 435 ntBASIC4.09□□□□□ -1.75
NEK3P51956 ELOCP4-201ENST00000420090 333 ntBASIC4.09□□□□□ -1.75
NEK3P51956 PIGFP2-201ENST00000421400 651 ntBASIC4.09□□□□□ -1.75
NEK3P51956 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.09□□□□□ -1.75
NEK3P51956 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.09□□□□□ -1.75
NEK3P51956 AL691449.1-201ENST00000426570 421 ntBASIC4.09□□□□□ -1.75
NEK3P51956 SETP5-201ENST00000437270 562 ntBASIC4.09□□□□□ -1.75
NEK3P51956 CBWD4P-201ENST00000445695 655 ntBASIC4.09□□□□□ -1.75
NEK3P51956 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.09□□□□□ -1.75
NEK3P51956 AL359385.1-201ENST00000456509 365 ntBASIC4.09□□□□□ -1.75
NEK3P51956 AC013267.1-201ENST00000458227 267 ntBASIC4.09□□□□□ -1.75
NEK3P51956 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.09□□□□□ -1.75
NEK3P51956 KLF3P2-201ENST00000465138 268 ntBASIC4.09□□□□□ -1.75
NEK3P51956 VN1R105P-201ENST00000486595 910 ntBASIC4.09□□□□□ -1.75
NEK3P51956 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.09□□□□□ -1.75
NEK3P51956 BTF3L4P4-201ENST00000506381 449 ntBASIC4.09□□□□□ -1.75
NEK3P51956 AC010460.1-201ENST00000507087 466 ntBASIC4.09□□□□□ -1.75
NEK3P51956 RNU6-927P-201ENST00000516199 100 ntBASIC4.09□□□□□ -1.75
NEK3P51956 RNU6-1256P-201ENST00000516539 103 ntBASIC4.09□□□□□ -1.75
NEK3P51956 MTCO2P4-201ENST00000517968 247 ntBASIC4.09□□□□□ -1.75
NEK3P51956 AC004024.1-201ENST00000549244 247 ntBASIC4.09□□□□□ -1.75
NEK3P51956 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.09□□□□□ -1.75
NEK3P51956 AC025627.2-201ENST00000576220 160 ntBASIC4.09□□□□□ -1.75
NEK3P51956 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.09□□□□□ -1.75
NEK3P51956 AC079089.3-201ENST00000603094 673 ntBASIC4.09□□□□□ -1.75
NEK3P51956 AP000860.1-201ENST00000605250 559 ntBASIC4.09□□□□□ -1.75
NEK3P51956 AL109618.2-201ENST00000605527 211 ntBASIC4.09□□□□□ -1.75
NEK3P51956 AC103710.3-201ENST00000608157 948 ntBASIC4.09□□□□□ -1.75
NEK3P51956 AC006566.1-201ENST00000608943 513 ntBASIC4.09□□□□□ -1.75
NEK3P51956 AL133173.2-201ENST00000614270 90 ntBASIC4.09□□□□□ -1.75
NEK3P51956 AC002076.2-201ENST00000617362 122 ntBASIC4.09□□□□□ -1.75
NEK3P51956 MIR6076-201ENST00000617521 113 ntBASIC4.09□□□□□ -1.75
NEK3P51956 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.09□□□□□ -1.75
NEK3P51956 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.09□□□□□ -1.75
NEK3P51956 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NEK3P51956 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NEK3P51956 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
NEK3P51956 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
NEK3P51956 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NEK3P51956 LINC02471-203ENST00000641941 4752 ntBASIC4.08□□□□□ -1.76
NEK3P51956 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
NEK3P51956 TPTE2P4-201ENST00000258589 1605 ntBASIC4.08□□□□□ -1.76
NEK3P51956 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NEK3P51956 SNORD35B-201ENST00000363660 87 ntBASIC4.08□□□□□ -1.76
NEK3P51956 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NEK3P51956 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
NEK3P51956 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NEK3P51956 Y_RNA.436-201ENST00000384097 102 ntBASIC4.08□□□□□ -1.76
NEK3P51956 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.08□□□□□ -1.76
NEK3P51956 DEFB108C-201ENST00000400154 252 ntBASIC4.08□□□□□ -1.76
NEK3P51956 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NEK3P51956 MTND3P17-201ENST00000416968 344 ntBASIC4.08□□□□□ -1.76
NEK3P51956 RAC1P6-201ENST00000423911 575 ntBASIC4.08□□□□□ -1.76
NEK3P51956 RPL7P2-201ENST00000427639 268 ntBASIC4.08□□□□□ -1.76
NEK3P51956 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.08□□□□□ -1.76
NEK3P51956 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NEK3P51956 AL031667.1-201ENST00000440222 725 ntBASIC4.08□□□□□ -1.76
NEK3P51956 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.08□□□□□ -1.76
NEK3P51956 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.08□□□□□ -1.76
NEK3P51956 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.08□□□□□ -1.76
NEK3P51956 AC010342.1-201ENST00000514047 877 ntBASIC4.08□□□□□ -1.76
NEK3P51956 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
NEK3P51956 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.08□□□□□ -1.76
NEK3P51956 RNA5SP291-201ENST00000517222 105 ntBASIC4.08□□□□□ -1.76
NEK3P51956 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.08□□□□□ -1.76
NEK3P51956 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms