Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RPL31P61-201ENST00000496160 376 ntBASIC3.62□□□□□ -1.83
SOX2P48431 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX2P48431 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX2P48431 AC105417.1-201ENST00000514691 285 ntBASIC3.62□□□□□ -1.83
SOX2P48431 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX2P48431 RNA5SP519-201ENST00000516480 119 ntBASIC3.62□□□□□ -1.83
SOX2P48431 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.62□□□□□ -1.83
SOX2P48431 RNA5SP309-201ENST00000516670 106 ntBASIC3.62□□□□□ -1.83
SOX2P48431 RNU6-1092P-201ENST00000516955 87 ntBASIC3.62□□□□□ -1.83
SOX2P48431 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.62□□□□□ -1.83
SOX2P48431 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX2P48431 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.62□□□□□ -1.83
SOX2P48431 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.62□□□□□ -1.83
SOX2P48431 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.62□□□□□ -1.83
SOX2P48431 AC068831.4-201ENST00000556118 109 ntBASIC3.62□□□□□ -1.83
SOX2P48431 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.62□□□□□ -1.83
SOX2P48431 NCAPGP2-201ENST00000557911 754 ntBASIC3.62□□□□□ -1.83
SOX2P48431 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX2P48431 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.62□□□□□ -1.83
SOX2P48431 RPL23AP87-202ENST00000573039 466 ntBASIC3.62□□□□□ -1.83
SOX2P48431 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
SOX2P48431 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.62□□□□□ -1.83
SOX2P48431 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.62□□□□□ -1.83
SOX2P48431 AF038458.1-201ENST00000588406 262 ntBASIC3.62□□□□□ -1.83
SOX2P48431 BNIP3P9-201ENST00000603714 553 ntBASIC3.62□□□□□ -1.83
SOX2P48431 BNIP3P10-201ENST00000605360 577 ntBASIC3.62□□□□□ -1.83
SOX2P48431 LARP7P1-201ENST00000605576 316 ntBASIC3.62□□□□□ -1.83
SOX2P48431 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SOX2P48431 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SOX2P48431 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.62□□□□□ -1.83
SOX2P48431 MTND5P17-201ENST00000418405 1603 ntBASIC3.62□□□□□ -1.83
SOX2P48431 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.62□□□□□ -1.83
SOX2P48431 AL365440.1-201ENST00000436135 2167 ntBASIC3.62□□□□□ -1.83
SOX2P48431 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SOX2P48431 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SOX2P48431 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
SOX2P48431 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.61□□□□□ -1.83
SOX2P48431 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.61□□□□□ -1.83
SOX2P48431 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SOX2P48431 NACAP2-201ENST00000318548 624 ntBASIC3.61□□□□□ -1.83
SOX2P48431 AC007685.1-201ENST00000329806 452 ntBASIC3.61□□□□□ -1.83
SOX2P48431 SNORA62.1-201ENST00000364287 154 ntBASIC3.61□□□□□ -1.83
SOX2P48431 SNORA23-201ENST00000365128 182 ntBASIC3.61□□□□□ -1.83
SOX2P48431 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SOX2P48431 RNU6-882P-201ENST00000391025 103 ntBASIC3.61□□□□□ -1.83
SOX2P48431 AL354719.1-201ENST00000406535 843 ntBASIC3.61□□□□□ -1.83
SOX2P48431 RNU6-1068P-201ENST00000410958 103 ntBASIC3.61□□□□□ -1.83
SOX2P48431 RNU6-373P-201ENST00000411247 98 ntBASIC3.61□□□□□ -1.83
SOX2P48431 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.61□□□□□ -1.83
SOX2P48431 AL590762.4-201ENST00000425885 253 ntBASIC3.61□□□□□ -1.83
SOX2P48431 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.61□□□□□ -1.83
SOX2P48431 AC087650.1-201ENST00000431445 468 ntBASIC3.61□□□□□ -1.83
SOX2P48431 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SOX2P48431 RPL36AP6-201ENST00000435770 321 ntBASIC3.61□□□□□ -1.83
SOX2P48431 AC098614.3-201ENST00000438957 440 ntBASIC3.61□□□□□ -1.83
SOX2P48431 MTND4P25-201ENST00000441039 533 ntBASIC3.61□□□□□ -1.83
SOX2P48431 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.61□□□□□ -1.83
SOX2P48431 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.61□□□□□ -1.83
SOX2P48431 MRPS17P3-201ENST00000465453 385 ntBASIC3.61□□□□□ -1.83
SOX2P48431 GMFBP1-201ENST00000467831 427 ntBASIC3.61□□□□□ -1.83
SOX2P48431 RN7SL826P-201ENST00000479724 288 ntBASIC3.61□□□□□ -1.83
SOX2P48431 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.61□□□□□ -1.83
SOX2P48431 NIPA2P2-201ENST00000496376 1083 ntBASIC3.61□□□□□ -1.83
SOX2P48431 AC008628.2-201ENST00000502605 298 ntBASIC3.61□□□□□ -1.83
SOX2P48431 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.61□□□□□ -1.83
SOX2P48431 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.61□□□□□ -1.83
SOX2P48431 AC114781.4-201ENST00000513707 639 ntBASIC3.61□□□□□ -1.83
SOX2P48431 AC046134.1-201ENST00000514454 666 ntBASIC3.61□□□□□ -1.83
SOX2P48431 SNORD60.2-201ENST00000516883 86 ntBASIC3.61□□□□□ -1.83
SOX2P48431 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.61□□□□□ -1.83
SOX2P48431 GNRHR2P1-201ENST00000555315 631 ntBASIC3.61□□□□□ -1.83
SOX2P48431 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.61□□□□□ -1.83
SOX2P48431 AC015917.1-201ENST00000579654 510 ntBASIC3.61□□□□□ -1.83
SOX2P48431 MIR4443-201ENST00000585052 53 ntBASIC3.61□□□□□ -1.83
SOX2P48431 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.61□□□□□ -1.83
SOX2P48431 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.61□□□□□ -1.83
SOX2P48431 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.61□□□□□ -1.83
SOX2P48431 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.61□□□□□ -1.83
SOX2P48431 AC104662.1-201ENST00000604448 511 ntBASIC3.61□□□□□ -1.83
SOX2P48431 AL035413.2-201ENST00000604801 525 ntBASIC3.61□□□□□ -1.83
SOX2P48431 AC012443.1-201ENST00000605605 231 ntBASIC3.61□□□□□ -1.83
SOX2P48431 RMST_3.1-201ENST00000611651 109 ntBASIC3.61□□□□□ -1.83
SOX2P48431 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.61□□□□□ -1.83
SOX2P48431 AC093648.1-201ENST00000623546 606 ntBASIC3.61□□□□□ -1.83
SOX2P48431 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.61□□□□□ -1.83
SOX2P48431 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.61□□□□□ -1.83
SOX2P48431 AP001486.2-201ENST00000561652 5113 ntBASIC3.61□□□□□ -1.83
SOX2P48431 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SOX2P48431 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SOX2P48431 EXOC5P1-201ENST00000510543 1969 ntBASIC3.61□□□□□ -1.83
SOX2P48431 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SOX2P48431 MTND4P12-201ENST00000498999 1377 ntBASIC3.61□□□□□ -1.83
SOX2P48431 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SOX2P48431 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SOX2P48431 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SOX2P48431 AC106871.1-201ENST00000568324 3102 ntBASIC3.6□□□□□ -1.83
SOX2P48431 OR56B2P-202ENST00000641377 2453 ntBASIC3.6□□□□□ -1.83
SOX2P48431 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.6□□□□□ -1.83
SOX2P48431 CBX3P1-201ENST00000325243 554 ntBASIC3.6□□□□□ -1.83
SOX2P48431 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms