Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.64□□□□□ -1.99
CTDNEP1O95476 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.64□□□□□ -1.99
CTDNEP1O95476 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.64□□□□□ -1.99
CTDNEP1O95476 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.64□□□□□ -1.99
CTDNEP1O95476 AC079776.3-201ENST00000450665 370 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.64□□□□□ -1.99
CTDNEP1O95476 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CTDNEP1O95476 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CTDNEP1O95476 UBE2V1P12-201ENST00000503954 474 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CTDNEP1O95476 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CTDNEP1O95476 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CTDNEP1O95476 MTND5P4-201ENST00000514978 288 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.64□□□□□ -1.99
CTDNEP1O95476 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CTDNEP1O95476 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CTDNEP1O95476 AC087241.2-201ENST00000535801 324 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 HSPE1P20-201ENST00000538133 289 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.64□□□□□ -1.99
CTDNEP1O95476 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.64□□□□□ -1.99
CTDNEP1O95476 MIR5708-201ENST00000579723 85 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 AC016597.2-201ENST00000613256 341 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.64□□□□□ -1.99
CTDNEP1O95476 AL121895.2-201ENST00000619558 447 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.64□□□□□ -1.99
CTDNEP1O95476 AC079228.1-201ENST00000624774 1049 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 OR4G3P-201ENST00000633500 913 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 AC087821.2-201ENST00000637086 450 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CTDNEP1O95476 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CTDNEP1O95476 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CTDNEP1O95476 MTND5P6-201ENST00000422338 1798 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
CTDNEP1O95476 ZNF720P1-201ENST00000562403 1939 ntBASIC2.64□□□□□ -1.99
CTDNEP1O95476 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.63□□□□□ -1.99
CTDNEP1O95476 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
CTDNEP1O95476 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CTDNEP1O95476 RNU6-251P-201ENST00000363235 104 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 SNORD114-30-201ENST00000364448 72 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 SNORA40.2-201ENST00000390847 128 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 SNORD65.1-201ENST00000390889 71 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 AL139095.1-201ENST00000404326 391 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 RNA5SP492-201ENST00000411330 114 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 RPL19P1-201ENST00000411635 428 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.63□□□□□ -1.99
CTDNEP1O95476 LUZP4P1-201ENST00000415420 344 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 RPL21P32-201ENST00000419877 477 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 AC093155.1-201ENST00000440164 826 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 AL358794.1-201ENST00000445689 381 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 Z96811.1-201ENST00000445880 108 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.63□□□□□ -1.99
CTDNEP1O95476 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.63□□□□□ -1.99
CTDNEP1O95476 TRBV26-201ENST00000456572 344 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 RPS29P12-201ENST00000460178 152 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 AC084024.2-201ENST00000503480 791 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.63□□□□□ -1.99
CTDNEP1O95476 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CTDNEP1O95476 MTCO3P44-201ENST00000510977 541 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.63□□□□□ -1.99
CTDNEP1O95476 RNU6-415P-201ENST00000516252 97 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 RNA5SP281-201ENST00000516504 135 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CTDNEP1O95476 AC009097.3-201ENST00000563557 1018 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 AC087481.2-201ENST00000565492 330 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 MTND3P13-201ENST00000574391 343 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 AC015688.2-201ENST00000584523 262 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.63□□□□□ -1.99
CTDNEP1O95476 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.63□□□□□ -1.99
CTDNEP1O95476 XIAPP1-201ENST00000603162 600 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 AC128687.1-201ENST00000605304 619 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.63□□□□□ -1.99
CTDNEP1O95476 PART1_2.1-201ENST00000612397 250 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 AC010975.3-201ENST00000618727 978 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.63□□□□□ -1.99
CTDNEP1O95476 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.63□□□□□ -1.99
CTDNEP1O95476 AL157770.1-201ENST00000623049 439 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.63□□□□□ -1.99
CTDNEP1O95476 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.63□□□□□ -1.99
CTDNEP1O95476 AC244517.1-201ENST00000606030 2086 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 Z99496.1-201ENST00000469424 1477 ntBASIC2.63□□□□□ -1.99
CTDNEP1O95476 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CTDNEP1O95476 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CTDNEP1O95476 AP005901.5-201ENST00000545779 1796 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 AC091564.4-201ENST00000533934 2194 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 ZNF29P-201ENST00000225587 168 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 RPL21P132-201ENST00000331267 462 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 RNU6-799P-201ENST00000363567 107 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 RNU6-115P-201ENST00000364310 107 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 snoZ40.1-201ENST00000364540 72 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 Y_RNA.408-201ENST00000383987 102 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 RPS4XP7-201ENST00000406274 780 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 AL133264.1-201ENST00000407157 562 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 MTCO2P8-201ENST00000412213 658 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.62□□□□□ -1.99
CTDNEP1O95476 AC092634.6-201ENST00000418558 192 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 MTND2P9-201ENST00000422293 931 ntBASIC2.62□□□□□ -1.99
CTDNEP1O95476 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.62□□□□□ -1.99
CTDNEP1O95476 AC096632.1-201ENST00000427395 310 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms