Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RPL31P54-201ENST00000429803 370 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 AC005345.1-201ENST00000431868 217 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.44□□□□□ -2.02
SHOX2O60902 WASF1P1-201ENST00000447560 1131 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 AL050341.1-201ENST00000447743 313 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 RPL7P55-201ENST00000450522 746 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.44□□□□□ -2.02
SHOX2O60902 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.44□□□□□ -2.02
SHOX2O60902 snoU13.15-201ENST00000459407 104 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 HIGD1AP13-201ENST00000509878 289 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 AC010625.1-201ENST00000511296 403 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.44□□□□□ -2.02
SHOX2O60902 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SHOX2O60902 AP000867.2-201ENST00000532468 320 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.44□□□□□ -2.02
SHOX2O60902 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.44□□□□□ -2.02
SHOX2O60902 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.44□□□□□ -2.02
SHOX2O60902 LINC00557-201ENST00000563184 1279 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.44□□□□□ -2.02
SHOX2O60902 ZNF92P2-201ENST00000600543 1059 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 AL158827.2-201ENST00000602494 330 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 AL691447.3-201ENST00000635020 330 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 MAPK10-266ENST00000641066 6555 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 AC026241.1-201ENST00000517873 2142 ntBASIC2.44□□□□□ -2.02
SHOX2O60902 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
SHOX2O60902 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SHOX2O60902 AC131280.1-202ENST00000624067 4211 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.43□□□□□ -2.02
SHOX2O60902 AL139276.1-201ENST00000311910 1001 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 MIRLET7G-201ENST00000362280 84 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 RNA5SP37-201ENST00000365420 130 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 AL355615.1-201ENST00000406187 641 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 MIR1287-201ENST00000408492 90 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.43□□□□□ -2.02
SHOX2O60902 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.43□□□□□ -2.02
SHOX2O60902 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.43□□□□□ -2.02
SHOX2O60902 AC087499.2-201ENST00000432861 149 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 ATP5F1P1-201ENST00000433775 569 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 AC241584.1-201ENST00000438469 1241 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SHOX2O60902 AL135938.1-201ENST00000443141 297 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 AL121871.1-201ENST00000443413 436 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 AL096803.2-201ENST00000450032 677 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 MTND2P3-201ENST00000452458 470 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 AC234775.1-201ENST00000454247 670 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 TPRKBP1-201ENST00000456243 481 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.43□□□□□ -2.02
SHOX2O60902 RPL36AP51-201ENST00000487216 318 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 AC006445.2-201ENST00000510061 472 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 AP003102.1-201ENST00000525638 661 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 OR4R1P-201ENST00000529879 463 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.43□□□□□ -2.02
SHOX2O60902 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.43□□□□□ -2.02
SHOX2O60902 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.43□□□□□ -2.02
SHOX2O60902 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.43□□□□□ -2.02
SHOX2O60902 AC008739.2-201ENST00000597006 317 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 AL022099.1-201ENST00000604551 712 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 AC012467.1-201ENST00000607740 256 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 AL590396.4-201ENST00000636779 956 ntBASIC2.43□□□□□ -2.02
SHOX2O60902 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SHOX2O60902 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SHOX2O60902 ADAM3A-203ENST00000461344 2157 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 MTND4P21-201ENST00000453886 1357 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 RNU6-792P-201ENST00000363490 107 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SHOX2O60902 SNORD116-23-201ENST00000384645 92 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SHOX2O60902 RNU4-27P-201ENST00000410889 139 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 RNU2-25P-201ENST00000411041 191 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 MORF4L1P6-201ENST00000418771 268 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 AC246680.2-201ENST00000422106 389 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.42□□□□□ -2.02
SHOX2O60902 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.42□□□□□ -2.02
SHOX2O60902 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.42□□□□□ -2.02
SHOX2O60902 IFNA11P-201ENST00000446352 526 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 MTCO1P48-201ENST00000448024 1096 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 DPPA3P1-201ENST00000448050 469 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 Z82190.1-201ENST00000454534 490 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.42□□□□□ -2.02
SHOX2O60902 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.42□□□□□ -2.02
SHOX2O60902 AC090255.1-201ENST00000495779 349 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.42□□□□□ -2.02
SHOX2O60902 AC109471.1-201ENST00000511631 612 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 SETP12-201ENST00000514068 805 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.42□□□□□ -2.02
SHOX2O60902 AC008127.2-201ENST00000549925 1075 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.42□□□□□ -2.02
SHOX2O60902 AC015712.3-201ENST00000559380 164 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.42□□□□□ -2.02
SHOX2O60902 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.42□□□□□ -2.02
SHOX2O60902 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.42□□□□□ -2.02
SHOX2O60902 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.42□□□□□ -2.02
SHOX2O60902 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.42□□□□□ -2.02
SHOX2O60902 AP002906.1-201ENST00000603405 233 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 AL356585.4-201ENST00000623078 1229 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 AL160394.1-201ENST00000624765 724 ntBASIC2.42□□□□□ -2.02
SHOX2O60902 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.42□□□□□ -2.02
SHOX2O60902 AC008568.2-201ENST00000623862 2313 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms