Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RSL24D1P3-201ENST00000449255 495 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.97□□□□□ -1.93
PDLIM1O00151 AC091153.1-201ENST00000466297 402 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PDLIM1O00151 AC104563.1-201ENST00000476147 376 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AC090525.1-201ENST00000479116 478 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.97□□□□□ -1.93
PDLIM1O00151 MTCYBP43-201ENST00000513621 740 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AC105185.1-201ENST00000518705 535 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.97□□□□□ -1.93
PDLIM1O00151 COX6CP8-201ENST00000522620 226 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.97□□□□□ -1.93
PDLIM1O00151 ELOCP31-201ENST00000540463 467 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AC023050.2-201ENST00000544968 387 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.97□□□□□ -1.93
PDLIM1O00151 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.97□□□□□ -1.93
PDLIM1O00151 AC074050.1-201ENST00000563247 211 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AL354943.1-201ENST00000572103 781 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.97□□□□□ -1.93
PDLIM1O00151 MIR3944-201ENST00000581277 108 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.97□□□□□ -1.93
PDLIM1O00151 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.97□□□□□ -1.93
PDLIM1O00151 AC006539.2-201ENST00000601729 572 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AL391001.1-201ENST00000602747 715 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AC022022.2-201ENST00000602989 360 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AL596327.1-201ENST00000603629 213 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AC011451.2-201ENST00000604303 598 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 AL133507.1-201ENST00000605269 557 ntBASIC2.97□□□□□ -1.93
PDLIM1O00151 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.97□□□□□ -1.93
PDLIM1O00151 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.97□□□□□ -1.93
PDLIM1O00151 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PDLIM1O00151 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PDLIM1O00151 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.96□□□□□ -1.93
PDLIM1O00151 RNU6-343P-201ENST00000364709 104 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 RNVU1-14-201ENST00000384770 164 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 RNU6-882P-201ENST00000391025 103 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PDLIM1O00151 MIR320C1-201ENST00000408566 88 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 BX682237.1-201ENST00000415016 335 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 HIGD1AP15-201ENST00000416198 280 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.96□□□□□ -1.94
PDLIM1O00151 Z96811.1-201ENST00000445880 108 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.96□□□□□ -1.94
PDLIM1O00151 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.96□□□□□ -1.94
PDLIM1O00151 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.96□□□□□ -1.94
PDLIM1O00151 PRSS3P4-201ENST00000453323 162 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.96□□□□□ -1.94
PDLIM1O00151 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.96□□□□□ -1.94
PDLIM1O00151 RNA5SP310-201ENST00000459084 116 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 AC104472.2-201ENST00000469035 601 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.96□□□□□ -1.94
PDLIM1O00151 RN7SL297P-201ENST00000483161 293 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.96□□□□□ -1.94
PDLIM1O00151 AL358832.1-201ENST00000497800 389 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 VN1R104P-201ENST00000505115 1009 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.96□□□□□ -1.94
PDLIM1O00151 CBX3P3-201ENST00000508108 532 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 AC024589.1-201ENST00000512207 263 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 AC017037.2-201ENST00000513850 890 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 SNORA31.1-201ENST00000515993 133 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 SNORA31.5-201ENST00000516190 133 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 RNU6-714P-201ENST00000516963 103 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 OR5G4P-201ENST00000525251 760 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.96□□□□□ -1.94
PDLIM1O00151 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.96□□□□□ -1.94
PDLIM1O00151 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.96□□□□□ -1.94
PDLIM1O00151 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.96□□□□□ -1.94
PDLIM1O00151 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PDLIM1O00151 AC006504.3-201ENST00000586818 523 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 AC083760.1-201ENST00000589621 670 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 AC106791.2-201ENST00000604680 391 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 RNU6-88P-201ENST00000606801 100 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 AL139418.1-201ENST00000613613 177 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 AL607023.1-201ENST00000620045 248 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 AP000676.4-201ENST00000624659 623 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 AC103706.2-201ENST00000638080 240 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 MTCO1P9-201ENST00000505577 1534 ntBASIC2.96□□□□□ -1.94
PDLIM1O00151 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.96□□□□□ -1.94
PDLIM1O00151 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PDLIM1O00151 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PDLIM1O00151 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.95□□□□□ -1.94
PDLIM1O00151 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PDLIM1O00151 FRG1BP-201ENST00000278882 761 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PDLIM1O00151 MIR208A-201ENST00000362287 71 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 RNU6-97P-201ENST00000363387 104 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PDLIM1O00151 RNU2-43P-201ENST00000410306 190 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 BX323014.1-201ENST00000412876 237 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 CCDC58P2-201ENST00000417131 366 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 AL158156.1-201ENST00000422509 473 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 XKRYP1-201ENST00000423438 492 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.95□□□□□ -1.94
PDLIM1O00151 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.95□□□□□ -1.94
PDLIM1O00151 AC005326.1-201ENST00000429197 123 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 XKRYP2-201ENST00000432915 492 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 RPL23AP58-201ENST00000440453 469 ntBASIC2.95□□□□□ -1.94
PDLIM1O00151 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PDLIM1O00151 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms