Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC092745.2-202ENST00000411880 369 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AC097499.1-201ENST00000444277 208 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 RPS29P26-201ENST00000477483 171 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 RPL31P60-201ENST00000478450 367 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AC021146.2-201ENST00000504736 556 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 SCARNA16.3-201ENST00000516595 184 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AC023632.4-201ENST00000517783 191 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AC103783.1-201ENST00000520506 373 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AC084824.1-201ENST00000550917 1005 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AL133241.1-201ENST00000556832 487 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 MTCYBP23-201ENST00000558717 1102 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 MIR4310-201ENST00000582950 57 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 NRBF2P1-201ENST00000587407 859 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 HMGB1P51-201ENST00000605166 638 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AC103810.6-201ENST00000606708 136 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 ATP5A1P2-202ENST00000616464 443 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AL590410.1-201ENST00000617925 333 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AC025048.6-202ENST00000627667 438 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AC025263.3-201ENST00000622965 1396 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AP000648.3-201ENST00000623539 4507 ntBASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CHKB-CPT1BH3BT56 SNORA16.1-201ENST00000364597 132 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 SNORA51.12-201ENST00000384448 134 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 CISD1P1-201ENST00000393907 327 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 AC244636.1-201ENST00000421152 228 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 PTP4A1P7-201ENST00000423476 514 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 AC027124.2-201ENST00000428249 105 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 ARL5AP3-201ENST00000439327 386 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 DNAJC19P4-201ENST00000440115 345 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 AP000936.2-201ENST00000447151 681 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 AC016724.1-201ENST00000453215 421 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 RN7SL807P-201ENST00000470923 297 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 AC079203.1-201ENST00000487972 404 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 AC104108.1-201ENST00000509930 412 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 MIR892C-201ENST00000516410 77 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 RNU1-45P-201ENST00000517191 141 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 AC025857.1-201ENST00000525252 377 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 AL354943.1-201ENST00000572103 781 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 VN1R92P-201ENST00000598511 928 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 MIR6820-201ENST00000611508 62 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 MIR6758-201ENST00000620653 63 ntBASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.02□□□□□ -2.25
CHKB-CPT1BH3BT56 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AC126755.2-208ENST00000327792 462 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AC138969.1-213ENST00000331436 462 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 MIR126-201ENST00000362291 85 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 MIR196B-201ENST00000384852 84 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 MIR934-201ENST00000401241 83 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 VN1R36P-201ENST00000414936 291 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 HMGB1P9-201ENST00000429856 646 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 USP9YP8-201ENST00000441913 500 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 CBWD4P-201ENST00000445695 655 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 MRPL35P4-201ENST00000453682 566 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms