Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AC011260.1-201ENST00000578420 472 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AC006557.5-201ENST00000603126 811 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AC112187.2-201ENST00000604345 283 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AL603758.1-201ENST00000618654 241 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AL603755.1-201ENST00000619504 163 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AC091965.5-201ENST00000624785 342 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AC019226.1-201ENST00000625666 515 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AC006927.3-201ENST00000638789 384 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AC005183.1-201ENST00000603687 1979 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AC012321.1-201ENST00000561622 1588 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 MAPK10-266ENST00000641066 6555 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AC032011.1-201ENST00000611703 1549 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 RNA5SP295-201ENST00000362655 121 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 Y_RNA.97-201ENST00000363094 102 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 RNU6-501P-201ENST00000364072 100 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 RNU6-432P-201ENST00000384196 109 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 MTND1P21-201ENST00000412991 285 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 RPL21P32-201ENST00000419877 477 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 RPS27AP14-201ENST00000422868 454 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AL512649.1-201ENST00000428997 581 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AL158071.1-201ENST00000430315 461 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 MTATP6P17-201ENST00000431030 672 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 RPL37P21-201ENST00000435890 276 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AL512286.1-201ENST00000439244 400 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 RPS29P31-201ENST00000446147 164 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 RPL23AP67-201ENST00000465341 474 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 RPS3AP43-201ENST00000479743 781 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AC135721.1-201ENST00000497954 479 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 DSTNP2-201ENST00000504533 515 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 RPF2P2-201ENST00000504693 896 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AC026333.2-201ENST00000542164 106 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 OR4T1P-201ENST00000554933 911 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AC090888.1-201ENST00000561335 1141 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AP005205.1-201ENST00000563503 508 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 PCMTD1P2-201ENST00000565017 355 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 MIR4738-201ENST00000579134 87 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 ZNF415P1-201ENST00000582279 1166 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AC008121.2-201ENST00000614647 523 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AC022149.2-201ENST00000621061 203 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AL159972.1-201ENST00000625150 448 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AL136164.4-201ENST00000625013 2135 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AL445523.1-201ENST00000451184 1362 ntBASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPIPA3F8WFD2 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NPIPA3F8WFD2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.1□□□□□ -1.91
NPIPA3F8WFD2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
NPIPA3F8WFD2 RNU5F-7P-201ENST00000363696 115 ntBASIC3.1□□□□□ -1.91
NPIPA3F8WFD2 RNU5A-2P-201ENST00000384337 116 ntBASIC3.1□□□□□ -1.91
NPIPA3F8WFD2 RNU6-754P-201ENST00000391166 107 ntBASIC3.1□□□□□ -1.91
NPIPA3F8WFD2 MTCYBP36-201ENST00000404146 440 ntBASIC3.1□□□□□ -1.91
NPIPA3F8WFD2 TPMTP3-201ENST00000411928 735 ntBASIC3.1□□□□□ -1.91
NPIPA3F8WFD2 MTND2P18-201ENST00000419962 1030 ntBASIC3.1□□□□□ -1.91
NPIPA3F8WFD2 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.1□□□□□ -1.91
NPIPA3F8WFD2 AC233728.2-201ENST00000425348 757 ntBASIC3.1□□□□□ -1.91
NPIPA3F8WFD2 AL365184.2-201ENST00000431139 435 ntBASIC3.1□□□□□ -1.91
NPIPA3F8WFD2 CYCSP32-201ENST00000440548 321 ntBASIC3.1□□□□□ -1.91
NPIPA3F8WFD2 TXNP1-201ENST00000441872 371 ntBASIC3.1□□□□□ -1.91
NPIPA3F8WFD2 GDI2P2-201ENST00000445131 608 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms