Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
COL6A6A6NMZ7 AC009487.4-201ENST00000624969 3585 ntBASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 AC008568.2-201ENST00000623862 2313 ntBASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 AC114546.3-201ENST00000623582 1734 ntBASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 MIR96-201ENST00000362288 78 ntBASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 ERHP2-201ENST00000402323 299 ntBASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 ARPC3P1-201ENST00000437218 533 ntBASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 MED6P1-201ENST00000439659 713 ntBASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 AP002345.1-201ENST00000456493 928 ntBASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 CABYRP1-201ENST00000465493 1045 ntBASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 AC027338.1-201ENST00000514840 825 ntBASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 AL160237.3-201ENST00000604114 1013 ntBASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 AL157834.3-201ENST00000615543 103 ntBASIC1.59□□□□□ -2.16
COL6A6A6NMZ7 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 AC244517.1-201ENST00000606030 2086 ntBASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 FNDC3CP-201ENST00000420795 1155 ntBASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 AC073464.3-201ENST00000422564 712 ntBASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 NEK4P1-201ENST00000433383 879 ntBASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 SETP8-201ENST00000435341 628 ntBASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 AL353898.1-201ENST00000444055 238 ntBASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 CLIC4P1-201ENST00000453177 535 ntBASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 AC108734.3-201ENST00000481241 1165 ntBASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 SUMO1P1-201ENST00000497904 306 ntBASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 RNA5SP402-201ENST00000517148 110 ntBASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 POLR2KP1-201ENST00000553226 168 ntBASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 AC025918.2-201ENST00000558683 763 ntBASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 ZNF92P2-201ENST00000600543 1059 ntBASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 AL391834.1-201ENST00000609609 560 ntBASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 AC116447.1-201ENST00000613153 453 ntBASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.58□□□□□ -2.16
COL6A6A6NMZ7 RNU6-252P-201ENST00000363232 107 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 RNA5SP160-201ENST00000364866 120 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 RNU6-185P-201ENST00000384421 107 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 RNU6-244P-201ENST00000391028 104 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 TOMM22P1-201ENST00000418578 312 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AC092832.1-201ENST00000422934 400 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 BNIP3P2-201ENST00000441221 577 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AP000852.1-201ENST00000472460 573 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 GTF2IP9-201ENST00000502460 301 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AC019176.1-201ENST00000518519 225 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AC104997.1-201ENST00000519761 717 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AC090751.1-201ENST00000566966 267 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AC040174.2-201ENST00000602701 465 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AC004775.1-201ENST00000607389 753 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AC006023.2-201ENST00000609916 167 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AL354696.1-201ENST00000614652 497 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 BX649567.1-201ENST00000642071 1134 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AL589826.1-201ENST00000340697 249 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 DYNLT3P1-201ENST00000378574 347 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AL445183.3-201ENST00000414168 502 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AL606495.1-201ENST00000422100 813 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 FO393419.3-201ENST00000428741 282 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AL645568.3-201ENST00000433683 316 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AL500527.1-201ENST00000448532 255 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 LTV1P1-201ENST00000510683 1237 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AP002748.2-201ENST00000528671 348 ntBASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.57□□□□□ -2.16
COL6A6A6NMZ7 RPS3AP23-202ENST00000574601 686 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms