Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 HMGB1P9-201ENST00000429856 646 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AC004865.1-201ENST00000442276 1003 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 OR2AF1P-201ENST00000454899 889 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AL049714.1-201ENST00000466686 347 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AC027575.1-201ENST00000481064 460 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 RPL23AP63-201ENST00000498752 471 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AC022447.1-201ENST00000515358 464 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 SNORD116-30-201ENST00000516468 85 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AC103783.1-201ENST00000520506 373 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 EEF1A1P37-201ENST00000522748 715 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AC007375.1-201ENST00000554513 578 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 MTCYBP27-201ENST00000555160 670 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AL160236.1-201ENST00000556317 195 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 GTF2IP8-201ENST00000560687 584 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 MIR5096-201ENST00000583713 70 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 TP73-AS1.1-201ENST00000611447 161 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 MIR6829-201ENST00000620375 67 ntBASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.95□□□□□ -2.26
LINC01558Q9Y6Z2 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 RNU6-730P-201ENST00000383954 104 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 POLHP1-201ENST00000411806 470 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 PTP4A1P7-201ENST00000423476 514 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 CHEK2P5-201ENST00000423877 246 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 MTCO3P46-201ENST00000425787 232 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AC092017.2-201ENST00000427600 362 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 NDUFA12P1-201ENST00000455914 406 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AC104164.3-201ENST00000467363 1258 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 CEACAMP10-202ENST00000495431 496 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 HIGD1AP13-201ENST00000509878 289 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 HMGB1P47-201ENST00000511281 589 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 HMGB1P1-201ENST00000522557 636 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AC017100.2-201ENST00000584628 355 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AL078605.1-201ENST00000603529 500 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AL022099.1-201ENST00000604551 712 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AC079791.1-201ENST00000605356 973 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AC055876.5-201ENST00000605667 259 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 uc_338.5-201ENST00000611839 155 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AC091304.6-201ENST00000619761 202 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AP002791.1-201ENST00000623291 381 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 AC025263.3-201ENST00000622965 1396 ntBASIC0.94□□□□□ -2.26
LINC01558Q9Y6Z2 HSPA8P4-201ENST00000511877 1920 ntBASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 AL356473.1-201ENST00000406203 1408 ntBASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 MIR518C-201ENST00000384822 101 ntBASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 U3.26-201ENST00000391236 204 ntBASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 AL033519.2-201ENST00000403958 392 ntBASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 SNORA11C-201ENST00000408532 129 ntBASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 EEF1A1P41-201ENST00000414667 207 ntBASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 AC107081.1-201ENST00000414975 361 ntBASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 EDDM3CP-201ENST00000415977 425 ntBASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 AC074117.2-201ENST00000417130 397 ntBASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 AC009237.2-201ENST00000421358 284 ntBASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 USP9YP15-201ENST00000442391 422 ntBASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.93□□□□□ -2.26
LINC01558Q9Y6Z2 AC005410.1-202ENST00000460347 485 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms