Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MED13P1-201ENST00000428342 171 ntBASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 AL359265.2-201ENST00000434367 631 ntBASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 RPL7AP61-201ENST00000443410 636 ntBASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 AC112693.2-201ENST00000556538 232 ntBASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 AC008687.2-201ENST00000597865 520 ntBASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 AL161637.1-201ENST00000622380 412 ntBASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 RNU6-128P-201ENST00000383976 107 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 AL138885.1-201ENST00000405921 675 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 RPS16P5-201ENST00000406501 404 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 RNU6-1156P-201ENST00000410365 100 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 AC119751.6-201ENST00000416712 186 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 EI24P4-201ENST00000423683 1078 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 MRPS18BP2-201ENST00000434310 759 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 AC093156.1-201ENST00000440382 670 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 AC008267.6-201ENST00000441664 139 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 AC104563.1-201ENST00000476147 376 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 AC008897.1-201ENST00000494006 347 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 Y_RNA.719-201ENST00000517156 106 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 IGKV2-23-201ENST00000518729 323 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 IGKV2D-10-201ENST00000520194 281 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 MRPS18CP4-201ENST00000535821 231 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 AC093023.1-201ENST00000547375 507 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 AC008745.1-201ENST00000604064 271 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 uc_338.12-201ENST00000616344 181 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 AL357559.1-201ENST00000622228 274 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 BX322639.1-202ENST00000423987 2213 ntBASIC6.52□□□□□ -1.37
PDZRN3Q9UPQ7 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 AC046144.1-201ENST00000478559 1853 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 AL022311.1-201ENST00000623726 19416 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 DHX40P1-201ENST00000588725 1412 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 SNORD62.1-201ENST00000362541 86 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 Y_RNA.76-201ENST00000362931 109 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 Y_RNA.240-201ENST00000364469 95 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 SNORA23-201ENST00000365128 182 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 RNA5SP219-201ENST00000390940 113 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 RNU6-131P-201ENST00000391144 107 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 AL136131.1-201ENST00000406079 803 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 RNU6-1135P-201ENST00000411083 103 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 BX842559.1-201ENST00000419615 532 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 AL031584.1-201ENST00000447169 754 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 AC016925.1-201ENST00000458303 298 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 RPS23P5-201ENST00000495419 428 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 AL035404.1-201ENST00000497982 568 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 COX6B1P5-201ENST00000509843 249 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 AC006427.1-201ENST00000514359 712 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 AC007991.1-201ENST00000522680 631 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 AP000907.2-201ENST00000530827 353 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 MIR5692C1-201ENST00000585309 91 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 VN1R91P-201ENST00000594377 169 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 AP001486.3-201ENST00000615334 372 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 AL591926.8-201ENST00000616876 211 ntBASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
PDZRN3Q9UPQ7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms