Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC140725.3-201ENST00000616193 880 ntBASIC3.73□□□□□ -1.81
BLOC1S4Q9NUP1 AL355365.1-201ENST00000616480 294 ntBASIC3.73□□□□□ -1.81
BLOC1S4Q9NUP1 AC110774.1-201ENST00000623567 2018 ntBASIC3.73□□□□□ -1.81
BLOC1S4Q9NUP1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.73□□□□□ -1.81
BLOC1S4Q9NUP1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
BLOC1S4Q9NUP1 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 MIR183-201ENST00000384958 110 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 RNU1-101P-201ENST00000391171 127 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AC093578.1-201ENST00000415219 368 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AL512649.1-201ENST00000428997 581 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 ATG12P2-201ENST00000456830 416 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 RNU6-420P-201ENST00000458780 107 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 RNU7-59P-201ENST00000459101 61 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AC021146.5-201ENST00000503544 545 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AC006445.2-201ENST00000510061 472 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 MTND1P22-201ENST00000510572 951 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 OR4T1P-201ENST00000554933 911 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 RPL21P12-201ENST00000559810 515 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AL355816.2-201ENST00000610049 647 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AC090132.2-201ENST00000615881 347 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AC009159.2-201ENST00000617603 606 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AL356321.1-201ENST00000621360 228 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 U6.105-201ENST00000637379 88 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 AC233263.6-201ENST00000631132 1963 ntBASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
BLOC1S4Q9NUP1 OR4G2P-202ENST00000641004 1759 ntBASIC3.71□□□□□ -1.81
BLOC1S4Q9NUP1 AC103988.1-201ENST00000566382 2177 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 RN7SKP285-201ENST00000410137 318 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 UBE2FP1-201ENST00000416536 447 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 AL445669.1-201ENST00000426743 755 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 MTND5P25-201ENST00000430499 799 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 AC092573.2-201ENST00000434546 243 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 RPL7L1P8-201ENST00000469911 741 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 RNU6-1129P-201ENST00000515964 104 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 RNU6-1282P-201ENST00000516735 96 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 RNA5SP291-201ENST00000517222 105 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 AP000857.1-201ENST00000532151 543 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 ZNF321P-202ENST00000550843 495 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 MIR5047-201ENST00000579212 100 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 AC008507.1-201ENST00000587506 734 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 TPMTP1-201ENST00000592307 737 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 PRELID3BP8-201ENST00000604148 295 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 AL139344.1-201ENST00000605228 195 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 AC103710.1-201ENST00000610003 901 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 OR8B1P-202ENST00000641132 1178 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 MTND4P16-201ENST00000466108 1367 ntBASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.71□□□□□ -1.82
BLOC1S4Q9NUP1 CCT4P2-201ENST00000233836 1548 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AC022336.2-201ENST00000568966 2538 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 RNA5SP50-201ENST00000363731 107 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AC110754.1-201ENST00000399740 601 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 RNA5SP229-201ENST00000410809 99 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 SPA17P1-201ENST00000416656 452 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 RPS27AP14-201ENST00000422868 454 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AL390023.1-201ENST00000428836 262 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AC097713.2-201ENST00000430199 356 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 MTCO3P45-201ENST00000443036 613 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 OR6C5P-201ENST00000452388 923 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AC092798.1-201ENST00000458542 409 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 RPS15AP36-201ENST00000492022 382 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms