Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 RNU7-143P-201ENST00000516781 65 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 HMGB1P41-201ENST00000520234 440 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.71□□□□□ -1.82
NPAS1Q99742 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.71□□□□□ -1.82
NPAS1Q99742 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.71□□□□□ -1.82
NPAS1Q99742 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.71□□□□□ -1.82
NPAS1Q99742 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.71□□□□□ -1.82
NPAS1Q99742 AC136624.4-201ENST00000573044 370 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.71□□□□□ -1.82
NPAS1Q99742 AC067959.1-201ENST00000604334 379 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
NPAS1Q99742 U4.5-201ENST00000617137 123 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 SNHG22-203ENST00000617833 660 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 AL360181.4-201ENST00000621752 134 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 MIR492-201ENST00000638676 116 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NPAS1Q99742 GABPAP-201ENST00000419271 1356 ntBASIC3.71□□□□□ -1.82
NPAS1Q99742 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.71□□□□□ -1.82
NPAS1Q99742 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPAS1Q99742 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NPAS1Q99742 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPAS1Q99742 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
NPAS1Q99742 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.71□□□□□ -1.82
NPAS1Q99742 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.71□□□□□ -1.82
NPAS1Q99742 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
NPAS1Q99742 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPAS1Q99742 TNPO1P3-201ENST00000436471 2662 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPAS1Q99742 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPAS1Q99742 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPAS1Q99742 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPAS1Q99742 RNA5SP388-201ENST00000362584 119 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 Y_RNA.372-201ENST00000365599 102 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 RNU6-641P-201ENST00000384006 107 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 MIR181A1-201ENST00000385026 110 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 MIR607-201ENST00000385241 96 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 RPL17P50-201ENST00000396131 546 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 AL022722.2-201ENST00000402519 180 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPAS1Q99742 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.7□□□□□ -1.82
NPAS1Q99742 AC069157.1-201ENST00000421749 137 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 RPL23AP30-201ENST00000432419 501 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.7□□□□□ -1.82
NPAS1Q99742 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.7□□□□□ -1.82
NPAS1Q99742 AC079781.2-201ENST00000446424 169 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 Z99127.3-201ENST00000448158 395 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.7□□□□□ -1.82
NPAS1Q99742 AC093392.2-201ENST00000450682 337 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 SNRPGP6-201ENST00000451124 220 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 RPS7P7-201ENST00000463499 571 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 AC010631.1-201ENST00000474150 156 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 AC126182.1-201ENST00000478134 357 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 AC108860.1-201ENST00000484521 383 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.7□□□□□ -1.82
NPAS1Q99742 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.7□□□□□ -1.82
NPAS1Q99742 SAP18P1-201ENST00000512058 390 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 AC023141.12-201ENST00000512399 199 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.7□□□□□ -1.82
NPAS1Q99742 RNU6-410P-201ENST00000517006 107 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.7□□□□□ -1.82
NPAS1Q99742 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.7□□□□□ -1.82
NPAS1Q99742 ERHP1-201ENST00000523006 310 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 OR4R1P-201ENST00000529879 463 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.7□□□□□ -1.82
NPAS1Q99742 AC093012.1-202ENST00000549403 582 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 ARL2BPP2-201ENST00000550907 489 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.7□□□□□ -1.82
NPAS1Q99742 AP001094.1-201ENST00000579805 193 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 MIR5684-201ENST00000585074 65 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.7□□□□□ -1.82
NPAS1Q99742 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.7□□□□□ -1.82
NPAS1Q99742 AL391261.4-201ENST00000616012 481 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 AC068831.8-201ENST00000620171 435 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 AC110801.1-201ENST00000623590 212 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 RNA5SP196-201ENST00000625967 102 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 AL157786.1-207ENST00000627771 695 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPAS1Q99742 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NPAS1Q99742 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.7□□□□□ -1.82
NPAS1Q99742 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
NPAS1Q99742 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.7□□□□□ -1.82
NPAS1Q99742 RPS4XP5-202ENST00000449995 1334 ntBASIC3.7□□□□□ -1.82
NPAS1Q99742 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPAS1Q99742 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NPAS1Q99742 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.69□□□□□ -1.82
NPAS1Q99742 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.69□□□□□ -1.82
NPAS1Q99742 RNU1-39P-201ENST00000383897 165 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 RPS26P8-201ENST00000393490 348 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NPAS1Q99742 AC110754.1-201ENST00000399740 601 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 AL136372.1-201ENST00000403060 228 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 BTF3P7-201ENST00000407097 488 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 RNU2-36P-201ENST00000410361 191 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 HSPE1P12-201ENST00000412576 301 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.69□□□□□ -1.82
NPAS1Q99742 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.69□□□□□ -1.82
NPAS1Q99742 USP12PX-201ENST00000432383 1057 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 CYCSP43-201ENST00000438233 310 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 BNIP3P2-201ENST00000441221 577 ntBASIC3.69□□□□□ -1.82
NPAS1Q99742 AC016696.1-201ENST00000446949 318 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 242.6 ms