Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AP002884.2-201ENST00000471647 395 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC006483.1-201ENST00000487308 313 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 RPS3AP22-201ENST00000488297 769 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 KCTD9P5-201ENST00000504141 1170 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC010486.2-201ENST00000505572 483 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC006445.2-201ENST00000510061 472 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC109464.2-201ENST00000510242 943 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 MRPS33P3-201ENST00000513456 322 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 RNU6-150P-201ENST00000516237 95 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AP003461.1-201ENST00000528866 78 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC007834.2-201ENST00000536310 343 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 OR6C7P-201ENST00000547875 934 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC008088.1-201ENST00000580993 280 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AP001429.1-201ENST00000602568 530 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC007179.3-201ENST00000604976 235 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AL592221.1-201ENST00000605266 382 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC138932.5-201ENST00000617759 563 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 MIR6130-201ENST00000619419 109 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AL445264.1-201ENST00000621719 171 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AP003122.6-201ENST00000623831 495 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC103706.2-201ENST00000638080 240 ntBASIC3.27□□□□□ -1.89
RTL3Q8N8U3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
RTL3Q8N8U3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 Y_RNA.234-201ENST00000364409 97 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 RNU6-952P-201ENST00000391164 108 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 MIR1284-201ENST00000408337 120 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 RNU6-757P-201ENST00000410334 100 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 RPS7P13-201ENST00000413955 498 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AL590383.1-201ENST00000428602 75 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 RPL26P6-201ENST00000440913 438 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 MTND3P1-201ENST00000441336 220 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AC104978.1-201ENST00000449387 391 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 HMGB3P8-201ENST00000449709 577 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 RN7SL863P-201ENST00000462370 296 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 RN7SL442P-201ENST00000473804 320 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 RPL7P18-201ENST00000478965 734 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AC010587.2-201ENST00000511727 448 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 RNU1-143P-201ENST00000516296 146 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 DEFB131D-201ENST00000526803 184 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 OSBPL9P5-201ENST00000542581 171 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AC005951.1-201ENST00000576706 485 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AC079089.3-201ENST00000603094 673 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AC012468.1-201ENST00000604888 430 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AL158211.4-201ENST00000606988 584 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AC131235.4-201ENST00000609288 620 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 U1.23-201ENST00000610293 146 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 RNU1-68P-201ENST00000615382 146 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AC002550.2-201ENST00000621246 394 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 U1.39-201ENST00000621562 146 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AC008443.7-201ENST00000622195 246 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AC027309.3-201ENST00000623419 351 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 TPTE2P4-201ENST00000258589 1605 ntBASIC3.26□□□□□ -1.89
RTL3Q8N8U3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.26□□□□□ -1.89
RTL3Q8N8U3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AC012321.1-201ENST00000561622 1588 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 MAPK10-362ENST00000641864 4484 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AL161781.1-201ENST00000354277 403 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 MIR208A-201ENST00000362287 71 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms