Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC091390.3-201ENST00000426478 338 ntBASIC2.6□□□□□ -1.99
HMGCS1Q01581 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.6□□□□□ -1.99
HMGCS1Q01581 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.6□□□□□ -1.99
HMGCS1Q01581 MTND4LP10-201ENST00000435146 291 ntBASIC2.6□□□□□ -1.99
HMGCS1Q01581 RPL21P2-201ENST00000440049 481 ntBASIC2.6□□□□□ -1.99
HMGCS1Q01581 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
HMGCS1Q01581 EEF1A1P39-201ENST00000440791 250 ntBASIC2.6□□□□□ -1.99
HMGCS1Q01581 AL135938.1-201ENST00000443141 297 ntBASIC2.6□□□□□ -1.99
HMGCS1Q01581 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.6□□□□□ -1.99
HMGCS1Q01581 AL590664.1-201ENST00000448065 339 ntBASIC2.6□□□□□ -1.99
HMGCS1Q01581 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HMGCS1Q01581 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.6□□□□□ -1.99
HMGCS1Q01581 AC005410.1-202ENST00000460347 485 ntBASIC2.6□□□□□ -1.99
HMGCS1Q01581 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.6□□□□□ -1.99
HMGCS1Q01581 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.6□□□□□ -1.99
HMGCS1Q01581 AC117522.3-201ENST00000507974 584 ntBASIC2.6□□□□□ -1.99
HMGCS1Q01581 RNY4P37-201ENST00000516225 96 ntBASIC2.6□□□□□ -1.99
HMGCS1Q01581 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.6□□□□□ -1.99
HMGCS1Q01581 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.6□□□□□ -1.99
HMGCS1Q01581 SLC2A13P1-201ENST00000531560 322 ntBASIC2.6□□□□□ -1.99
HMGCS1Q01581 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.6□□□□□ -1.99
HMGCS1Q01581 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.6□□□□□ -1.99
HMGCS1Q01581 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.6□□□□□ -1.99
HMGCS1Q01581 AC007954.1-201ENST00000554198 494 ntBASIC2.6□□□□□ -1.99
HMGCS1Q01581 EIF4BP1-201ENST00000554881 351 ntBASIC2.6□□□□□ -1.99
HMGCS1Q01581 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HMGCS1Q01581 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.6□□□□□ -1.99
HMGCS1Q01581 FAM60BP-201ENST00000578364 658 ntBASIC2.6□□□□□ -1.99
HMGCS1Q01581 AC008277.2-201ENST00000605196 797 ntBASIC2.6□□□□□ -1.99
HMGCS1Q01581 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.6□□□□□ -1.99
HMGCS1Q01581 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.6□□□□□ -1.99
HMGCS1Q01581 AC106028.5-201ENST00000610332 395 ntBASIC2.6□□□□□ -1.99
HMGCS1Q01581 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
HMGCS1Q01581 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.59□□□□□ -1.99
HMGCS1Q01581 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HMGCS1Q01581 RNU1-112P-201ENST00000364401 164 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 RNU6-413P-201ENST00000384115 107 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 SNORD51-201ENST00000384320 80 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 RPL21P75-201ENST00000396599 483 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 RPL21P28-201ENST00000401418 483 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 DHFRP6-201ENST00000401776 268 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 ERHP2-201ENST00000402323 299 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 AL138827.1-201ENST00000402666 306 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 AL592114.1-201ENST00000403842 483 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 AL645937.1-202ENST00000421799 937 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 COTL1P1-201ENST00000422309 375 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 OFD1P3Y-201ENST00000453312 783 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 AL031183.1-201ENST00000457667 207 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 snoU109.4-201ENST00000458953 143 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 AC026410.2-201ENST00000460281 156 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 RPL21P39-201ENST00000463605 483 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 RPL21P93-201ENST00000480465 489 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 AC233702.1-201ENST00000482905 502 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 AC087190.1-201ENST00000484462 480 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 AC093591.1-201ENST00000491435 481 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 AC134050.1-201ENST00000495088 933 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 RPL21P16-201ENST00000495531 483 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 AC097462.2-201ENST00000504623 481 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.59□□□□□ -1.99
HMGCS1Q01581 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.59□□□□□ -1.99
HMGCS1Q01581 HSPE1P20-201ENST00000538133 289 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 AC024224.1-201ENST00000538284 609 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.59□□□□□ -1.99
HMGCS1Q01581 AC079600.2-201ENST00000550076 130 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 AP005205.1-201ENST00000563503 508 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 LARP7P3-201ENST00000579888 337 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 MIR4637-201ENST00000582405 84 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 RPL23AP92-201ENST00000603609 255 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 AC011458.1-201ENST00000604034 617 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 AC055876.5-201ENST00000605667 259 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 AC131902.3-201ENST00000611767 581 ntBASIC2.59□□□□□ -1.99
HMGCS1Q01581 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.59□□□□□ -1.99
HMGCS1Q01581 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.59□□□□□ -1.99
HMGCS1Q01581 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
HMGCS1Q01581 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.59□□□□□ -2
HMGCS1Q01581 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.59□□□□□ -2
HMGCS1Q01581 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -2
HMGCS1Q01581 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
HMGCS1Q01581 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
HMGCS1Q01581 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
HMGCS1Q01581 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HMGCS1Q01581 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.58□□□□□ -2
HMGCS1Q01581 RNU6-878P-201ENST00000384578 110 ntBASIC2.58□□□□□ -2
HMGCS1Q01581 SNORA1.3-201ENST00000384676 136 ntBASIC2.58□□□□□ -2
HMGCS1Q01581 RNA5SP252-201ENST00000391131 119 ntBASIC2.58□□□□□ -2
HMGCS1Q01581 CYCSP45-201ENST00000402289 315 ntBASIC2.58□□□□□ -2
HMGCS1Q01581 RNU2-47P-201ENST00000410649 186 ntBASIC2.58□□□□□ -2
HMGCS1Q01581 MTCO2P8-201ENST00000412213 658 ntBASIC2.58□□□□□ -2
HMGCS1Q01581 NANOGP5-201ENST00000424456 877 ntBASIC2.58□□□□□ -2
HMGCS1Q01581 AC007742.1-201ENST00000425789 329 ntBASIC2.58□□□□□ -2
HMGCS1Q01581 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.58□□□□□ -2
HMGCS1Q01581 ELOCP26-201ENST00000436067 329 ntBASIC2.58□□□□□ -2
HMGCS1Q01581 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.58□□□□□ -2
HMGCS1Q01581 MTND2P20-201ENST00000440805 661 ntBASIC2.58□□□□□ -2
HMGCS1Q01581 ZNF886P-201ENST00000450781 723 ntBASIC2.58□□□□□ -2
HMGCS1Q01581 RPL18AP17-201ENST00000455326 198 ntBASIC2.58□□□□□ -2
HMGCS1Q01581 RPS29P12-201ENST00000460178 152 ntBASIC2.58□□□□□ -2
HMGCS1Q01581 RPS27AP9-201ENST00000477681 438 ntBASIC2.58□□□□□ -2
HMGCS1Q01581 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.58□□□□□ -2
HMGCS1Q01581 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms