Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
HERVK_113P62684 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HERVK_113P62684 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HERVK_113P62684 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HERVK_113P62684 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.74□□□□□ -1.65
HERVK_113P62684 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.74□□□□□ -1.65
HERVK_113P62684 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HERVK_113P62684 AC019155.1-201ENST00000382242 574 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 RNU6-213P-201ENST00000384051 104 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 MIR449B-201ENST00000384995 97 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 AL121834.1-202ENST00000404494 277 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 AC007390.1-201ENST00000415722 356 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 AL161631.1-201ENST00000417933 486 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.74□□□□□ -1.65
HERVK_113P62684 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.74□□□□□ -1.65
HERVK_113P62684 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.74□□□□□ -1.65
HERVK_113P62684 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.74□□□□□ -1.65
HERVK_113P62684 NANOGP10-201ENST00000453325 895 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 RPL5P30-201ENST00000465511 891 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 AL049714.1-201ENST00000466686 347 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 AL139099.1-201ENST00000497398 403 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HERVK_113P62684 AC022690.1-201ENST00000526681 550 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HERVK_113P62684 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.74□□□□□ -1.65
HERVK_113P62684 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.74□□□□□ -1.65
HERVK_113P62684 RPL21P12-201ENST00000559810 515 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.74□□□□□ -1.65
HERVK_113P62684 AC010525.2-201ENST00000590920 195 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 AL139395.1-201ENST00000603662 160 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 AC013553.2-201ENST00000604244 589 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 AL592436.1-201ENST00000605135 558 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 AL121772.2-201ENST00000614331 297 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 AC009233.1-201ENST00000616477 371 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.74□□□□□ -1.65
HERVK_113P62684 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
HERVK_113P62684 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.74□□□□□ -1.65
HERVK_113P62684 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HERVK_113P62684 AC106871.1-201ENST00000568324 3102 ntBASIC4.74□□□□□ -1.65
HERVK_113P62684 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
HERVK_113P62684 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HERVK_113P62684 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HERVK_113P62684 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
HERVK_113P62684 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.74□□□□□ -1.65
HERVK_113P62684 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.74□□□□□ -1.65
HERVK_113P62684 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HERVK_113P62684 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.73□□□□□ -1.65
HERVK_113P62684 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HERVK_113P62684 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HERVK_113P62684 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
HERVK_113P62684 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.73□□□□□ -1.65
HERVK_113P62684 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
HERVK_113P62684 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HERVK_113P62684 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HERVK_113P62684 RNU5A-8P-201ENST00000364102 114 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 AL354719.1-201ENST00000406535 843 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 RPS23P10-201ENST00000416185 486 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.73□□□□□ -1.65
HERVK_113P62684 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.73□□□□□ -1.65
HERVK_113P62684 RBMY1KP-201ENST00000423480 476 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 RPL30P3-201ENST00000424262 333 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.73□□□□□ -1.65
HERVK_113P62684 OR4K11P-201ENST00000431829 904 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 TBCAP1-201ENST00000436520 327 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 AL353691.1-201ENST00000451332 387 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 BX276092.4-201ENST00000452056 248 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 CACYBPP2-201ENST00000453625 678 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 AC114797.1-201ENST00000514003 728 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 RNU6-1153P-201ENST00000516760 105 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.73□□□□□ -1.65
HERVK_113P62684 OR8L1P-201ENST00000534005 955 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 AC007424.1-203ENST00000554613 687 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 OR4K8P-201ENST00000578842 1048 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 COX6CP3-201ENST00000580869 223 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 MIR5684-201ENST00000585074 65 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 GLUD1P4-201ENST00000590914 418 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.73□□□□□ -1.65
HERVK_113P62684 AC245517.5-201ENST00000611529 162 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HERVK_113P62684 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HERVK_113P62684 AC000123.3-201ENST00000624029 4975 ntBASIC4.73□□□□□ -1.65
HERVK_113P62684 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HERVK_113P62684 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HERVK_113P62684 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HERVK_113P62684 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
HERVK_113P62684 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.73□□□□□ -1.65
HERVK_113P62684 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HERVK_113P62684 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
HERVK_113P62684 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HERVK_113P62684 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HERVK_113P62684 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HERVK_113P62684 AL161912.2-201ENST00000565707 3007 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 RPL7P26-201ENST00000333817 754 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 MIR448-201ENST00000362131 111 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 SNORA60-201ENST00000362396 134 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 RNA5SP387-201ENST00000364226 106 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 SNORD81.2-201ENST00000365153 76 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 RNU6-74P-201ENST00000384235 107 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 RNU6-39P-201ENST00000384344 107 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 MIR19A-201ENST00000384878 82 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms