Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 COX7BP2-201ENST00000437976 242 ntBASIC3.12□□□□□ -1.91
SRP54P61011 SSXP5-201ENST00000443473 287 ntBASIC3.12□□□□□ -1.91
SRP54P61011 Z99127.3-201ENST00000448158 395 ntBASIC3.12□□□□□ -1.91
SRP54P61011 MTND1P31-201ENST00000449206 961 ntBASIC3.12□□□□□ -1.91
SRP54P61011 AC146507.2-201ENST00000460608 476 ntBASIC3.12□□□□□ -1.91
SRP54P61011 RPL7P18-201ENST00000478965 734 ntBASIC3.12□□□□□ -1.91
SRP54P61011 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.12□□□□□ -1.91
SRP54P61011 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.12□□□□□ -1.91
SRP54P61011 SNORA31.22-201ENST00000517204 135 ntBASIC3.12□□□□□ -1.91
SRP54P61011 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.12□□□□□ -1.91
SRP54P61011 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SRP54P61011 AL157394.1-201ENST00000562983 1224 ntBASIC3.12□□□□□ -1.91
SRP54P61011 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.12□□□□□ -1.91
SRP54P61011 UBL5P2-201ENST00000583788 219 ntBASIC3.12□□□□□ -1.91
SRP54P61011 MTCO2P2-201ENST00000591258 225 ntBASIC3.12□□□□□ -1.91
SRP54P61011 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.12□□□□□ -1.91
SRP54P61011 AC080013.3-201ENST00000606839 578 ntBASIC3.12□□□□□ -1.91
SRP54P61011 AL158211.4-201ENST00000606988 584 ntBASIC3.12□□□□□ -1.91
SRP54P61011 AC016597.2-201ENST00000613256 341 ntBASIC3.12□□□□□ -1.91
SRP54P61011 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SRP54P61011 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SRP54P61011 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.11□□□□□ -1.91
SRP54P61011 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
SRP54P61011 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.11□□□□□ -1.91
SRP54P61011 AC087359.1-201ENST00000508335 1740 ntBASIC3.11□□□□□ -1.91
SRP54P61011 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SRP54P61011 SDAD1P2-201ENST00000441308 2028 ntBASIC3.11□□□□□ -1.91
SRP54P61011 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.11□□□□□ -1.91
SRP54P61011 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SRP54P61011 RNU5A-1-201ENST00000362698 116 ntBASIC3.11□□□□□ -1.91
SRP54P61011 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SRP54P61011 Y_RNA.548-201ENST00000384656 105 ntBASIC3.11□□□□□ -1.91
SRP54P61011 RNU6-1197P-201ENST00000391183 107 ntBASIC3.11□□□□□ -1.91
SRP54P61011 UBA52P6-201ENST00000399822 382 ntBASIC3.11□□□□□ -1.91
SRP54P61011 TPMTP3-201ENST00000411928 735 ntBASIC3.11□□□□□ -1.91
SRP54P61011 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.11□□□□□ -1.91
SRP54P61011 PPP1R11P2-201ENST00000423543 382 ntBASIC3.11□□□□□ -1.91
SRP54P61011 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.11□□□□□ -1.91
SRP54P61011 MTCO2P20-201ENST00000437339 673 ntBASIC3.11□□□□□ -1.91
SRP54P61011 HMGB3P11-201ENST00000440127 604 ntBASIC3.11□□□□□ -1.91
SRP54P61011 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.11□□□□□ -1.91
SRP54P61011 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.11□□□□□ -1.91
SRP54P61011 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.11□□□□□ -1.91
SRP54P61011 HSPE1P6-201ENST00000479457 291 ntBASIC3.11□□□□□ -1.91
SRP54P61011 AC021382.1-201ENST00000483523 359 ntBASIC3.11□□□□□ -1.91
SRP54P61011 RPL30P5-201ENST00000494923 336 ntBASIC3.11□□□□□ -1.91
SRP54P61011 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.11□□□□□ -1.91
SRP54P61011 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.11□□□□□ -1.91
SRP54P61011 RNA5SP216-201ENST00000516111 123 ntBASIC3.11□□□□□ -1.91
SRP54P61011 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.11□□□□□ -1.91
SRP54P61011 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.11□□□□□ -1.91
SRP54P61011 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.11□□□□□ -1.91
SRP54P61011 AP002404.1-201ENST00000532005 451 ntBASIC3.11□□□□□ -1.91
SRP54P61011 AC125611.2-201ENST00000551907 647 ntBASIC3.11□□□□□ -1.91
SRP54P61011 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.11□□□□□ -1.91
SRP54P61011 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.11□□□□□ -1.91
SRP54P61011 AC106782.4-201ENST00000568264 210 ntBASIC3.11□□□□□ -1.91
SRP54P61011 MTCO3P24-201ENST00000572729 782 ntBASIC3.11□□□□□ -1.91
SRP54P61011 AC006539.2-201ENST00000601729 572 ntBASIC3.11□□□□□ -1.91
SRP54P61011 AL133507.1-201ENST00000605269 557 ntBASIC3.11□□□□□ -1.91
SRP54P61011 AC090186.1-201ENST00000605991 572 ntBASIC3.11□□□□□ -1.91
SRP54P61011 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.11□□□□□ -1.91
SRP54P61011 AC099506.2-201ENST00000623074 221 ntBASIC3.11□□□□□ -1.91
SRP54P61011 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.11□□□□□ -1.91
SRP54P61011 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.11□□□□□ -1.91
SRP54P61011 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.11□□□□□ -1.91
SRP54P61011 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SRP54P61011 AC092447.10-201ENST00000620607 1652 ntBASIC3.11□□□□□ -1.91
SRP54P61011 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.1□□□□□ -1.91
SRP54P61011 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SRP54P61011 AC012321.1-201ENST00000561622 1588 ntBASIC3.1□□□□□ -1.91
SRP54P61011 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SRP54P61011 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SRP54P61011 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SRP54P61011 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SRP54P61011 SNORA51.4-201ENST00000364993 124 ntBASIC3.1□□□□□ -1.91
SRP54P61011 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.1□□□□□ -1.91
SRP54P61011 RNU6-1207P-201ENST00000384343 107 ntBASIC3.1□□□□□ -1.91
SRP54P61011 SNORA26.7-201ENST00000391288 122 ntBASIC3.1□□□□□ -1.91
SRP54P61011 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.1□□□□□ -1.91
SRP54P61011 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.1□□□□□ -1.91
SRP54P61011 NDUFB4P7-201ENST00000423198 363 ntBASIC3.1□□□□□ -1.91
SRP54P61011 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.1□□□□□ -1.91
SRP54P61011 AL356867.1-201ENST00000429623 299 ntBASIC3.1□□□□□ -1.91
SRP54P61011 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.1□□□□□ -1.91
SRP54P61011 RSL24D1P3-201ENST00000449255 495 ntBASIC3.1□□□□□ -1.91
SRP54P61011 AL590639.1-201ENST00000456484 337 ntBASIC3.1□□□□□ -1.91
SRP54P61011 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.1□□□□□ -1.91
SRP54P61011 HMGN1P18-201ENST00000457642 277 ntBASIC3.1□□□□□ -1.91
SRP54P61011 RPL30P9-201ENST00000465586 330 ntBASIC3.1□□□□□ -1.91
SRP54P61011 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
SRP54P61011 RPL31P60-201ENST00000478450 367 ntBASIC3.1□□□□□ -1.91
SRP54P61011 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.1□□□□□ -1.91
SRP54P61011 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.1□□□□□ -1.91
SRP54P61011 AC111000.2-201ENST00000507775 550 ntBASIC3.1□□□□□ -1.91
SRP54P61011 SNORA64.4-201ENST00000516632 81 ntBASIC3.1□□□□□ -1.91
SRP54P61011 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.1□□□□□ -1.91
SRP54P61011 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.1□□□□□ -1.91
SRP54P61011 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.1□□□□□ -1.91
SRP54P61011 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms