Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC107081.1-201ENST00000414975 361 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
MTHFRP42898 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.55□□□□□ -1.84
MTHFRP42898 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.55□□□□□ -1.84
MTHFRP42898 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.55□□□□□ -1.84
MTHFRP42898 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.55□□□□□ -1.84
MTHFRP42898 LSM1P1-201ENST00000438629 273 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 RABEPKP1-201ENST00000440529 1026 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.55□□□□□ -1.84
MTHFRP42898 MTATP6P26-201ENST00000445926 662 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 NANOGNBP1-201ENST00000448444 480 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 PAXBP1P1-201ENST00000449315 447 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.55□□□□□ -1.84
MTHFRP42898 snoU13.8-201ENST00000458890 104 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 AC004801.2-202ENST00000463559 283 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 AC109925.1-201ENST00000478069 331 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.55□□□□□ -1.84
MTHFRP42898 AC097462.2-201ENST00000504623 481 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.55□□□□□ -1.84
MTHFRP42898 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.55□□□□□ -1.84
MTHFRP42898 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.55□□□□□ -1.84
MTHFRP42898 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.55□□□□□ -1.84
MTHFRP42898 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.55□□□□□ -1.84
MTHFRP42898 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.55□□□□□ -1.84
MTHFRP42898 AL031176.1-201ENST00000604554 466 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 AC073657.2-201ENST00000605661 303 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 AC106028.5-201ENST00000610332 395 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 AL031667.3-201ENST00000620124 655 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.55□□□□□ -1.84
MTHFRP42898 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.55□□□□□ -1.84
MTHFRP42898 AC004944.1-201ENST00000517807 3059 ntBASIC3.55□□□□□ -1.84
MTHFRP42898 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MTHFRP42898 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MTHFRP42898 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
MTHFRP42898 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
MTHFRP42898 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 AC073073.2-201ENST00000609827 2578 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 SNORA80A-201ENST00000363922 136 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 Y_RNA.302-201ENST00000364997 102 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 RNU1-140P-201ENST00000365040 165 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 RNU6-744P-201ENST00000365557 107 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.54□□□□□ -1.84
MTHFRP42898 RNU6-1316P-201ENST00000384242 108 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 MIR184-201ENST00000384962 84 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
MTHFRP42898 AL138885.1-201ENST00000405921 675 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.54□□□□□ -1.84
MTHFRP42898 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.54□□□□□ -1.84
MTHFRP42898 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.54□□□□□ -1.84
MTHFRP42898 SNRPEP4-201ENST00000435815 279 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.54□□□□□ -1.84
MTHFRP42898 UBE2D3P1-201ENST00000436669 444 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 FTH1P25-201ENST00000447665 469 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.54□□□□□ -1.84
MTHFRP42898 AC104308.1-201ENST00000454621 333 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 AC104563.1-201ENST00000476147 376 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 AC072039.1-201ENST00000477611 581 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.54□□□□□ -1.84
MTHFRP42898 AC096576.1-201ENST00000489014 359 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.54□□□□□ -1.84
MTHFRP42898 MRPS33P3-201ENST00000513456 322 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.54□□□□□ -1.84
MTHFRP42898 RNU6-714P-201ENST00000516963 103 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.54□□□□□ -1.84
MTHFRP42898 OR5AP1P-201ENST00000529730 940 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 AC008015.1-201ENST00000555505 465 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.54□□□□□ -1.84
MTHFRP42898 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.54□□□□□ -1.84
MTHFRP42898 AC136618.2-201ENST00000575091 400 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 OR4K8P-201ENST00000578842 1048 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.54□□□□□ -1.84
MTHFRP42898 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.54□□□□□ -1.84
MTHFRP42898 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.54□□□□□ -1.84
MTHFRP42898 KLKP1-201ENST00000595979 403 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 AC008751.2-201ENST00000597885 980 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 AC018638.7-201ENST00000605836 1114 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 AL360219.1-201ENST00000610230 366 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 AL592295.2-201ENST00000612578 206 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 AC008121.2-201ENST00000614647 523 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 AC068831.7-201ENST00000616954 363 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 AP000676.3-201ENST00000623299 569 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 CU459211.1-201ENST00000635667 749 ntBASIC3.54□□□□□ -1.84
MTHFRP42898 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MTHFRP42898 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
MTHFRP42898 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MTHFRP42898 AL136372.1-201ENST00000403060 228 ntBASIC3.53□□□□□ -1.84
MTHFRP42898 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.53□□□□□ -1.84
MTHFRP42898 AC109780.2-201ENST00000413467 845 ntBASIC3.53□□□□□ -1.84
MTHFRP42898 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.53□□□□□ -1.84
MTHFRP42898 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.53□□□□□ -1.84
MTHFRP42898 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.53□□□□□ -1.84
MTHFRP42898 BX119904.4-201ENST00000424402 301 ntBASIC3.53□□□□□ -1.84
MTHFRP42898 ART2BP-201ENST00000453501 499 ntBASIC3.53□□□□□ -1.84
MTHFRP42898 RNU7-125P-201ENST00000458760 62 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms