Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RN7SKP53-201ENST00000411337 315 ntBASIC3.37□□□□□ -1.87
CDH3P22223 RNA5SP107-201ENST00000411358 122 ntBASIC3.37□□□□□ -1.87
CDH3P22223 RPL7P8-201ENST00000411964 730 ntBASIC3.37□□□□□ -1.87
CDH3P22223 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH3P22223 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH3P22223 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH3P22223 MTND4LP10-201ENST00000435146 291 ntBASIC3.37□□□□□ -1.87
CDH3P22223 SETP8-201ENST00000435341 628 ntBASIC3.37□□□□□ -1.87
CDH3P22223 AC091862.1-201ENST00000438016 1100 ntBASIC3.37□□□□□ -1.87
CDH3P22223 TRIM60P18-201ENST00000441518 828 ntBASIC3.37□□□□□ -1.87
CDH3P22223 MTND2P4-201ENST00000445034 1004 ntBASIC3.37□□□□□ -1.87
CDH3P22223 EPS15P1-201ENST00000448836 336 ntBASIC3.37□□□□□ -1.87
CDH3P22223 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH3P22223 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH3P22223 Z82190.1-201ENST00000454534 490 ntBASIC3.37□□□□□ -1.87
CDH3P22223 AC091179.1-201ENST00000461606 579 ntBASIC3.37□□□□□ -1.87
CDH3P22223 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH3P22223 AC106872.3-201ENST00000495104 446 ntBASIC3.37□□□□□ -1.87
CDH3P22223 AC022447.3-201ENST00000506865 495 ntBASIC3.37□□□□□ -1.87
CDH3P22223 AC105914.1-201ENST00000511798 226 ntBASIC3.37□□□□□ -1.87
CDH3P22223 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH3P22223 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH3P22223 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH3P22223 AC068587.4-201ENST00000533893 186 ntBASIC3.37□□□□□ -1.87
CDH3P22223 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH3P22223 AC007458.1-201ENST00000542812 373 ntBASIC3.37□□□□□ -1.87
CDH3P22223 AC126177.3-201ENST00000551839 688 ntBASIC3.37□□□□□ -1.87
CDH3P22223 AC011611.1-201ENST00000552179 197 ntBASIC3.37□□□□□ -1.87
CDH3P22223 SNORD84-203ENST00000584275 78 ntBASIC3.37□□□□□ -1.87
CDH3P22223 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH3P22223 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH3P22223 AC128687.1-201ENST00000605304 619 ntBASIC3.37□□□□□ -1.87
CDH3P22223 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH3P22223 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH3P22223 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CDH3P22223 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CDH3P22223 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH3P22223 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDH3P22223 ZNF833P-201ENST00000424938 1494 ntBASIC3.36□□□□□ -1.87
CDH3P22223 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CDH3P22223 RNU6-769P-201ENST00000384407 104 ntBASIC3.36□□□□□ -1.87
CDH3P22223 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH3P22223 MIR1305-201ENST00000408300 86 ntBASIC3.36□□□□□ -1.87
CDH3P22223 MTCO1P17-201ENST00000411522 491 ntBASIC3.36□□□□□ -1.87
CDH3P22223 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH3P22223 NPM1P11-201ENST00000417106 855 ntBASIC3.36□□□□□ -1.87
CDH3P22223 HSPE1P1-201ENST00000421494 318 ntBASIC3.36□□□□□ -1.87
CDH3P22223 BX119904.4-201ENST00000424402 301 ntBASIC3.36□□□□□ -1.87
CDH3P22223 AP000907.1-201ENST00000428428 510 ntBASIC3.36□□□□□ -1.87
CDH3P22223 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH3P22223 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH3P22223 SNRPEP4-201ENST00000435815 279 ntBASIC3.36□□□□□ -1.87
CDH3P22223 AC009969.1-201ENST00000438726 172 ntBASIC3.36□□□□□ -1.87
CDH3P22223 AL512286.1-201ENST00000439244 400 ntBASIC3.36□□□□□ -1.87
CDH3P22223 AL831737.1-201ENST00000441288 271 ntBASIC3.36□□□□□ -1.87
CDH3P22223 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH3P22223 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH3P22223 RBMY2UP-201ENST00000453474 324 ntBASIC3.36□□□□□ -1.87
CDH3P22223 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH3P22223 OR6K1P-201ENST00000456766 971 ntBASIC3.36□□□□□ -1.87
CDH3P22223 AC074250.1-201ENST00000511117 192 ntBASIC3.36□□□□□ -1.87
CDH3P22223 OR5BM1P-201ENST00000512021 366 ntBASIC3.36□□□□□ -1.87
CDH3P22223 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH3P22223 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH3P22223 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH3P22223 AC004024.1-201ENST00000549244 247 ntBASIC3.36□□□□□ -1.87
CDH3P22223 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH3P22223 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.36□□□□□ -1.87
CDH3P22223 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH3P22223 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDH3P22223 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH3P22223 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDH3P22223 BDH2P1-201ENST00000602288 736 ntBASIC3.36□□□□□ -1.87
CDH3P22223 AP000403.1-201ENST00000603349 851 ntBASIC3.36□□□□□ -1.87
CDH3P22223 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH3P22223 Z94722.1-201ENST00000604328 474 ntBASIC3.36□□□□□ -1.87
CDH3P22223 AC092354.1-201ENST00000606057 376 ntBASIC3.36□□□□□ -1.87
CDH3P22223 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH3P22223 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.36□□□□□ -1.87
CDH3P22223 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH3P22223 MIR7975-201ENST00000619350 68 ntBASIC3.36□□□□□ -1.87
CDH3P22223 AC048344.4-201ENST00000619744 527 ntBASIC3.36□□□□□ -1.87
CDH3P22223 AC008443.7-201ENST00000622195 246 ntBASIC3.36□□□□□ -1.87
CDH3P22223 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH3P22223 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH3P22223 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH3P22223 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH3P22223 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH3P22223 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH3P22223 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH3P22223 PABPC1P9-201ENST00000426076 1612 ntBASIC3.36□□□□□ -1.87
CDH3P22223 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH3P22223 AC092447.10-201ENST00000620607 1652 ntBASIC3.36□□□□□ -1.87
CDH3P22223 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CDH3P22223 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH3P22223 FAM35CP-201ENST00000554755 2470 ntBASIC3.35□□□□□ -1.87
CDH3P22223 AC006378.2-201ENST00000623178 2476 ntBASIC3.35□□□□□ -1.87
CDH3P22223 MIR208A-201ENST00000362287 71 ntBASIC3.35□□□□□ -1.87
CDH3P22223 RNA5SP42-201ENST00000364278 115 ntBASIC3.35□□□□□ -1.87
CDH3P22223 RNU4-40P-201ENST00000364351 143 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms