Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.83□□□□□ -1.8
MMP3P08254 RPS20P24-201ENST00000457473 361 ntBASIC3.83□□□□□ -1.8
MMP3P08254 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.83□□□□□ -1.8
MMP3P08254 AC109464.2-201ENST00000510242 943 ntBASIC3.83□□□□□ -1.8
MMP3P08254 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.83□□□□□ -1.8
MMP3P08254 RN7SKP83-201ENST00000516512 178 ntBASIC3.83□□□□□ -1.8
MMP3P08254 SNORA18.6-201ENST00000516792 115 ntBASIC3.83□□□□□ -1.8
MMP3P08254 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.83□□□□□ -1.8
MMP3P08254 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.83□□□□□ -1.8
MMP3P08254 AC022878.1-201ENST00000530684 149 ntBASIC3.83□□□□□ -1.8
MMP3P08254 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.83□□□□□ -1.8
MMP3P08254 AC034268.2-201ENST00000571784 482 ntBASIC3.83□□□□□ -1.8
MMP3P08254 MIR5680-201ENST00000577577 84 ntBASIC3.83□□□□□ -1.8
MMP3P08254 AL353997.4-201ENST00000586196 166 ntBASIC3.83□□□□□ -1.8
MMP3P08254 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.83□□□□□ -1.8
MMP3P08254 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MMP3P08254 AL713922.2-201ENST00000619384 716 ntBASIC3.83□□□□□ -1.8
MMP3P08254 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.83□□□□□ -1.8
MMP3P08254 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.83□□□□□ -1.8
MMP3P08254 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.83□□□□□ -1.8
MMP3P08254 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
MMP3P08254 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
MMP3P08254 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
MMP3P08254 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
MMP3P08254 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
MMP3P08254 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
MMP3P08254 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
MMP3P08254 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
MMP3P08254 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.82□□□□□ -1.8
MMP3P08254 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
MMP3P08254 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
MMP3P08254 PABPC1P7-201ENST00000413177 1513 ntBASIC3.82□□□□□ -1.8
MMP3P08254 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
MMP3P08254 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.82□□□□□ -1.8
MMP3P08254 Y_RNA.46-201ENST00000362695 102 ntBASIC3.82□□□□□ -1.8
MMP3P08254 RNY4P34-201ENST00000364779 95 ntBASIC3.82□□□□□ -1.8
MMP3P08254 HMGN2P8-201ENST00000391458 268 ntBASIC3.82□□□□□ -1.8
MMP3P08254 CCNG1P1-201ENST00000406783 885 ntBASIC3.82□□□□□ -1.8
MMP3P08254 RPS3AP3-201ENST00000411933 242 ntBASIC3.82□□□□□ -1.8
MMP3P08254 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.82□□□□□ -1.8
MMP3P08254 NANOGP6-201ENST00000429190 847 ntBASIC3.82□□□□□ -1.8
MMP3P08254 SKP1P1-201ENST00000438081 489 ntBASIC3.82□□□□□ -1.8
MMP3P08254 RPS29P31-201ENST00000446147 164 ntBASIC3.82□□□□□ -1.8
MMP3P08254 Z75741.1-201ENST00000446793 314 ntBASIC3.82□□□□□ -1.8
MMP3P08254 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.82□□□□□ -1.8
MMP3P08254 MTCYBP1-201ENST00000454315 1119 ntBASIC3.82□□□□□ -1.8
MMP3P08254 LARP1BP2-201ENST00000486594 519 ntBASIC3.82□□□□□ -1.8
MMP3P08254 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.82□□□□□ -1.8
MMP3P08254 AC112204.1-201ENST00000502591 103 ntBASIC3.82□□□□□ -1.8
MMP3P08254 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.82□□□□□ -1.8
MMP3P08254 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.82□□□□□ -1.8
MMP3P08254 RPL37P25-201ENST00000507308 276 ntBASIC3.82□□□□□ -1.8
MMP3P08254 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.82□□□□□ -1.8
MMP3P08254 TXNP6-201ENST00000510190 310 ntBASIC3.82□□□□□ -1.8
MMP3P08254 RN7SKP298-201ENST00000515950 94 ntBASIC3.82□□□□□ -1.8
MMP3P08254 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.82□□□□□ -1.8
MMP3P08254 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.82□□□□□ -1.8
MMP3P08254 AP003181.2-201ENST00000528941 181 ntBASIC3.82□□□□□ -1.8
MMP3P08254 AP003122.4-201ENST00000530980 758 ntBASIC3.82□□□□□ -1.8
MMP3P08254 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
MMP3P08254 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.82□□□□□ -1.8
MMP3P08254 AC016957.1-201ENST00000534895 309 ntBASIC3.82□□□□□ -1.8
MMP3P08254 AL157394.1-201ENST00000562983 1224 ntBASIC3.82□□□□□ -1.8
MMP3P08254 AC067852.3-201ENST00000589177 561 ntBASIC3.82□□□□□ -1.8
MMP3P08254 HMGN1P30-201ENST00000589286 268 ntBASIC3.82□□□□□ -1.8
MMP3P08254 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.82□□□□□ -1.8
MMP3P08254 AC006557.5-201ENST00000603126 811 ntBASIC3.82□□□□□ -1.8
MMP3P08254 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.82□□□□□ -1.8
MMP3P08254 AC138749.5-201ENST00000611461 208 ntBASIC3.82□□□□□ -1.8
MMP3P08254 AC087241.4-201ENST00000612441 480 ntBASIC3.82□□□□□ -1.8
MMP3P08254 AC116165.2-201ENST00000616705 206 ntBASIC3.82□□□□□ -1.8
MMP3P08254 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.82□□□□□ -1.8
MMP3P08254 AC110994.2-201ENST00000635481 492 ntBASIC3.82□□□□□ -1.8
MMP3P08254 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.82□□□□□ -1.8
MMP3P08254 Z83843.1-201ENST00000604070 3685 ntBASIC3.82□□□□□ -1.8
MMP3P08254 SAGE4P-201ENST00000442271 3381 ntBASIC3.82□□□□□ -1.8
MMP3P08254 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP3P08254 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MMP3P08254 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP3P08254 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
MMP3P08254 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.81□□□□□ -1.8
MMP3P08254 MAPK10-373ENST00000641983 6772 ntBASIC3.81□□□□□ -1.8
MMP3P08254 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
MMP3P08254 U3.15-201ENST00000365398 212 ntBASIC3.81□□□□□ -1.8
MMP3P08254 RNU6-517P-201ENST00000384362 110 ntBASIC3.81□□□□□ -1.8
MMP3P08254 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MMP3P08254 RPS3AP44-201ENST00000425466 790 ntBASIC3.81□□□□□ -1.8
MMP3P08254 AC006989.1-201ENST00000427212 131 ntBASIC3.81□□□□□ -1.8
MMP3P08254 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.81□□□□□ -1.8
MMP3P08254 C8orf59P1-201ENST00000429930 303 ntBASIC3.81□□□□□ -1.8
MMP3P08254 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.81□□□□□ -1.8
MMP3P08254 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.81□□□□□ -1.8
MMP3P08254 snoU13.8-201ENST00000458890 104 ntBASIC3.81□□□□□ -1.8
MMP3P08254 AC034222.1-201ENST00000494052 532 ntBASIC3.81□□□□□ -1.8
MMP3P08254 RN7SL504P-201ENST00000494496 287 ntBASIC3.81□□□□□ -1.8
MMP3P08254 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.81□□□□□ -1.8
MMP3P08254 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.81□□□□□ -1.8
MMP3P08254 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.81□□□□□ -1.8
MMP3P08254 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP3P08254 AL117351.2-201ENST00000513571 157 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms