Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PRELID2P1-201ENST00000552837 301 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DQB2P05538 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DQB2P05538 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DQB2P05538 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DQB2P05538 AC010378.1-201ENST00000619270 362 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 AC103798.2-201ENST00000624292 632 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 CU459211.1-201ENST00000635667 749 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.07
HLA-DQB2P05538 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HLA-DQB2P05538 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.07
HLA-DQB2P05538 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HLA-DQB2P05538 MFSD8-213ENST00000641134 1327 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
HLA-DQB2P05538 ZNF658B-202ENST00000615961 3375 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HLA-DQB2P05538 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AL445529.1-201ENST00000398713 389 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AL023807.1-201ENST00000407932 359 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AL135786.1-201ENST00000415892 214 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AL356320.2-201ENST00000417263 507 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.14□□□□□ -2.07
HLA-DQB2P05538 RPL7P30-201ENST00000420888 709 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 TMEM167AP1-201ENST00000423409 219 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 RPL7P37-201ENST00000425095 738 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AC012497.1-201ENST00000429392 575 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 RPL31P54-201ENST00000429803 370 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 MTND4LP10-201ENST00000435146 291 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 SDR42E1P3-201ENST00000438345 502 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AC092170.1-201ENST00000440211 356 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 SNRPGP6-201ENST00000451124 220 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AC010099.1-201ENST00000455434 375 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AC104090.1-201ENST00000506341 1171 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 OR4P1P-201ENST00000530808 1136 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AP000867.2-201ENST00000532468 320 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AP002770.2-201ENST00000543613 532 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AC091544.4-201ENST00000555268 342 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 MIR1273D-201ENST00000577266 86 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AC112503.2-201ENST00000609005 552 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.14□□□□□ -2.07
HLA-DQB2P05538 ZNF663P-202ENST00000641770 1131 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 AC012321.1-201ENST00000561622 1588 ntBASIC2.14□□□□□ -2.07
HLA-DQB2P05538 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
HLA-DQB2P05538 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
HLA-DQB2P05538 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
HLA-DQB2P05538 SNORA64-201ENST00000384674 134 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 AL121978.1-201ENST00000402778 359 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 RN7SKP32-201ENST00000410167 303 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 RNA5SP425-201ENST00000410336 112 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DQB2P05538 AL590762.3-201ENST00000436372 640 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 NDUFB4P6-201ENST00000436819 366 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 AC004866.2-201ENST00000438285 481 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DQB2P05538 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DQB2P05538 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DQB2P05538 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DQB2P05538 RPL9P6-201ENST00000492764 598 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 ANXA2P1-201ENST00000505539 926 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DQB2P05538 RNU6-27P-201ENST00000516146 107 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 AC124293.1-201ENST00000530034 493 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 ZNF705CP-201ENST00000530515 889 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 BPTFP1-201ENST00000579209 492 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 AC103810.1-201ENST00000579873 453 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DQB2P05538 AC010738.1-201ENST00000604970 987 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 AC024560.3-201ENST00000608482 349 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 AC006213.5-201ENST00000619673 288 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.13□□□□□ -2.07
HLA-DQB2P05538 AC110079.1-202ENST00000635213 138 ntBASIC2.13□□□□□ -2.07
HLA-DQB2P05538 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
HLA-DQB2P05538 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
HLA-DQB2P05538 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DQB2P05538 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HLA-DQB2P05538 AC087359.1-201ENST00000508335 1740 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
HLA-DQB2P05538 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.12□□□□□ -2.07
HLA-DQB2P05538 SNORD56.4-201ENST00000363883 71 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 RNU6-619P-201ENST00000365146 108 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 SNORA67.3-201ENST00000384366 140 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 MIR144-201ENST00000384886 86 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 MIR627-201ENST00000384979 97 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DQB2P05538 AL139156.1-201ENST00000412785 841 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DQB2P05538 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 CR848007.2-201ENST00000424918 787 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.12□□□□□ -2.07
HLA-DQB2P05538 EZH2P1-201ENST00000431167 291 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 AL139415.2-201ENST00000431968 163 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DQB2P05538 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DQB2P05538 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms