Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 HSPE1P7-201ENST00000604681 321 ntBASIC2.21□□□□□ -2.06
HLA-DQA1P01909 AC024933.1-201ENST00000608472 348 ntBASIC2.21□□□□□ -2.06
HLA-DQA1P01909 AC245297.2-201ENST00000610119 565 ntBASIC2.21□□□□□ -2.06
HLA-DQA1P01909 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DQA1P01909 AC016597.2-201ENST00000613256 341 ntBASIC2.21□□□□□ -2.06
HLA-DQA1P01909 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DQA1P01909 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DQA1P01909 OR4G3P-201ENST00000633500 913 ntBASIC2.21□□□□□ -2.06
HLA-DQA1P01909 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
HLA-DQA1P01909 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DQA1P01909 CUL1P1-201ENST00000509510 2425 ntBASIC2.21□□□□□ -2.06
HLA-DQA1P01909 AC090740.1-201ENST00000623193 2262 ntBASIC2.21□□□□□ -2.06
HLA-DQA1P01909 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DQA1P01909 AC011460.1-201ENST00000636268 1834 ntBASIC2.21□□□□□ -2.06
HLA-DQA1P01909 AP000776.1-201ENST00000530032 1663 ntBASIC2.21□□□□□ -2.06
HLA-DQA1P01909 GABRG2-229ENST00000641017 3628 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 RNU6-777P-201ENST00000364265 104 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 RNU6-76P-201ENST00000384060 104 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 RNU6-1207P-201ENST00000384343 107 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 MIR23B-201ENST00000384832 97 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 SNORA48.7-201ENST00000391302 135 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 RPS4XP3-201ENST00000398541 413 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AL139095.1-201ENST00000404326 391 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 FAT1P1-201ENST00000406588 507 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 RPL19P1-201ENST00000411635 428 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AL121871.1-201ENST00000443413 436 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AL592447.1-201ENST00000447592 540 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC234775.1-201ENST00000454247 670 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 SNORD121B-201ENST00000458838 81 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 snoU13.8-201ENST00000458890 104 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC104090.1-201ENST00000506341 1171 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC022483.1-201ENST00000514020 567 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 SNORA31.1-201ENST00000515993 133 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 SNORA31.5-201ENST00000516190 133 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AL355836.1-201ENST00000555951 870 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 MIR4429-201ENST00000580105 73 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC022662.1-201ENST00000580252 331 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC060766.3-201ENST00000591442 263 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AL031985.2-201ENST00000600955 480 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC011451.2-201ENST00000604303 598 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AL158211.4-201ENST00000606988 584 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AP000254.1-201ENST00000609934 520 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 MIR6076-201ENST00000617521 113 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC006111.3-201ENST00000622137 383 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AC008443.7-201ENST00000622195 246 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AP000676.4-201ENST00000624659 623 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 AL035425.3-201ENST00000564206 4996 ntBASIC2.2□□□□□ -2.06
HLA-DQA1P01909 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.2□□□□□ -2.06
HLA-DQA1P01909 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 SNORD15B-201ENST00000384714 146 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 MIR512-1-201ENST00000384913 84 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 U3.19-201ENST00000390893 196 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 RNA5SP252-201ENST00000391131 119 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 NDUFB4P6-201ENST00000436819 366 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 RPL23AP20-201ENST00000447965 421 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AL590664.1-201ENST00000448065 339 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 RBMY2UP-201ENST00000453474 324 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AC103975.1-201ENST00000482506 483 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 RPL30P14-201ENST00000482744 348 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 GTF2IP9-201ENST00000502460 301 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AL359273.1-201ENST00000510918 627 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AC010587.2-201ENST00000511727 448 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 SNORA31.15-201ENST00000516771 132 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 SCARNA1-201ENST00000517138 166 ntBASIC2.19□□□□□ -2.06
HLA-DQA1P01909 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.19□□□□□ -2.06
HLA-DQA1P01909 AP003497.1-201ENST00000528472 562 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms