Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 SNORD56.4-201ENST00000363883 71 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 SNORA67.4-201ENST00000384688 142 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 RNU6-821P-201ENST00000390995 107 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
UBFD1O14562 UBE2V1P11-201ENST00000411559 285 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
UBFD1O14562 USP9YP27-201ENST00000418455 438 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 Z82209.1-201ENST00000422141 2135 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.13□□□□□ -2.07
UBFD1O14562 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.13□□□□□ -2.07
UBFD1O14562 HIGD1AP2-201ENST00000446367 280 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 AL034418.1-201ENST00000448675 860 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.13□□□□□ -2.07
UBFD1O14562 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.13□□□□□ -2.07
UBFD1O14562 PABPC1P3-201ENST00000469174 459 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 RPS4XP6-201ENST00000477670 797 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 CBX3P3-201ENST00000508108 532 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 RNA5SP281-201ENST00000516504 135 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 AC026241.1-201ENST00000517873 2142 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.13□□□□□ -2.07
UBFD1O14562 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.13□□□□□ -2.07
UBFD1O14562 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.13□□□□□ -2.07
UBFD1O14562 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.13□□□□□ -2.07
UBFD1O14562 AP003122.3-201ENST00000526316 255 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 OR8K4P-201ENST00000534608 872 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.13□□□□□ -2.07
UBFD1O14562 AC007115.1-201ENST00000546853 234 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
UBFD1O14562 AC104229.1-201ENST00000561364 255 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.13□□□□□ -2.07
UBFD1O14562 MIR4769-201ENST00000584126 77 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.13□□□□□ -2.07
UBFD1O14562 AC098826.3-201ENST00000603823 466 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 DPRXP5-201ENST00000604662 539 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 AC106900.2-201ENST00000604994 317 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 AC006213.5-201ENST00000619673 288 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 AL360181.4-201ENST00000621752 134 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.13□□□□□ -2.07
UBFD1O14562 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.13□□□□□ -2.07
UBFD1O14562 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
UBFD1O14562 AC006020.1-201ENST00000420179 1854 ntBASIC2.13□□□□□ -2.07
UBFD1O14562 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.13□□□□□ -2.07
UBFD1O14562 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.13□□□□□ -2.07
UBFD1O14562 MTCO1P6-201ENST00000481192 1384 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
UBFD1O14562 Z98742.3-201ENST00000418637 326 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.12□□□□□ -2.07
UBFD1O14562 AL606495.1-201ENST00000422100 813 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 PTP4A1P7-201ENST00000423476 514 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 TOMM20P4-201ENST00000427861 435 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 AC012497.1-201ENST00000429392 575 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
UBFD1O14562 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.12□□□□□ -2.07
UBFD1O14562 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.12□□□□□ -2.07
UBFD1O14562 AL031659.1-201ENST00000447075 539 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.12□□□□□ -2.07
UBFD1O14562 AL118520.1-201ENST00000450770 291 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
UBFD1O14562 AL031183.1-201ENST00000457667 207 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 Y_RNA.638-201ENST00000459374 113 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 RPS29P21-201ENST00000496272 170 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 RN7SKP40-201ENST00000517211 242 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.12□□□□□ -2.07
UBFD1O14562 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
UBFD1O14562 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.12□□□□□ -2.07
UBFD1O14562 AC009063.1-201ENST00000563342 702 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 AC074051.3-201ENST00000570238 358 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 LRRC37A5P-203ENST00000580181 585 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.12□□□□□ -2.07
UBFD1O14562 AC034102.8-201ENST00000615146 484 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 AP006248.3-201ENST00000623580 594 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 AP000553.5-201ENST00000641933 54 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 AC135776.4-201ENST00000624300 1904 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 MTND5P6-201ENST00000422338 1798 ntBASIC2.12□□□□□ -2.07
UBFD1O14562 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
UBFD1O14562 SGO1P2-201ENST00000429458 1589 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.11□□□□□ -2.07
UBFD1O14562 RNU1-91P-201ENST00000364746 163 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
UBFD1O14562 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
UBFD1O14562 RNU6-1074P-201ENST00000383995 104 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.11□□□□□ -2.07
UBFD1O14562 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.11□□□□□ -2.07
UBFD1O14562 OR51A3P-201ENST00000413596 924 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 AC233981.1-201ENST00000423224 461 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 SDR42E1P3-201ENST00000438345 502 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.11□□□□□ -2.07
UBFD1O14562 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.11□□□□□ -2.07
UBFD1O14562 HMGN3P1-201ENST00000453847 193 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 TPRKBP1-201ENST00000456243 481 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.11□□□□□ -2.07
UBFD1O14562 RNA5SP310-201ENST00000459084 116 ntBASIC2.11□□□□□ -2.07
UBFD1O14562 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.11□□□□□ -2.07
UBFD1O14562 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.11□□□□□ -2.07
UBFD1O14562 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.11□□□□□ -2.07
UBFD1O14562 AC109471.1-201ENST00000511631 612 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms