Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC104685.1-201ENST00000502445 371 ntBASIC3.28□□□□□ -1.88
RTCAO00442 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.28□□□□□ -1.88
RTCAO00442 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.28□□□□□ -1.88
RTCAO00442 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.28□□□□□ -1.88
RTCAO00442 AC093809.1-201ENST00000509155 340 ntBASIC3.28□□□□□ -1.88
RTCAO00442 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.28□□□□□ -1.88
RTCAO00442 AC026801.2-201ENST00000515352 425 ntBASIC3.28□□□□□ -1.88
RTCAO00442 SNORA70.19-201ENST00000516717 90 ntBASIC3.28□□□□□ -1.88
RTCAO00442 RNU6-678P-201ENST00000516832 109 ntBASIC3.28□□□□□ -1.88
RTCAO00442 RNU6-528P-201ENST00000516926 100 ntBASIC3.28□□□□□ -1.88
RTCAO00442 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.28□□□□□ -1.88
RTCAO00442 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
RTCAO00442 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.28□□□□□ -1.88
RTCAO00442 MTND2P38-201ENST00000522536 667 ntBASIC3.28□□□□□ -1.88
RTCAO00442 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.28□□□□□ -1.88
RTCAO00442 AC008015.1-201ENST00000555505 465 ntBASIC3.28□□□□□ -1.88
RTCAO00442 MIR3158-1-201ENST00000583596 81 ntBASIC3.28□□□□□ -1.88
RTCAO00442 AP001429.1-201ENST00000602568 530 ntBASIC3.28□□□□□ -1.88
RTCAO00442 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.28□□□□□ -1.88
RTCAO00442 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.28□□□□□ -1.88
RTCAO00442 AC006133.1-201ENST00000617106 264 ntBASIC3.28□□□□□ -1.88
RTCAO00442 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RTCAO00442 AL603755.1-201ENST00000619504 163 ntBASIC3.28□□□□□ -1.88
RTCAO00442 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.28□□□□□ -1.88
RTCAO00442 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.28□□□□□ -1.88
RTCAO00442 AL392088.2-201ENST00000637607 285 ntBASIC3.28□□□□□ -1.88
RTCAO00442 AC012321.1-201ENST00000561622 1588 ntBASIC3.28□□□□□ -1.88
RTCAO00442 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTCAO00442 AC032011.1-201ENST00000611703 1549 ntBASIC3.28□□□□□ -1.88
RTCAO00442 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.28□□□□□ -1.88
RTCAO00442 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.89
RTCAO00442 AL022578.1-201ENST00000439330 1433 ntBASIC3.27□□□□□ -1.89
RTCAO00442 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.27□□□□□ -1.89
RTCAO00442 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.27□□□□□ -1.89
RTCAO00442 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTCAO00442 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RTCAO00442 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RTCAO00442 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTCAO00442 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
RTCAO00442 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTCAO00442 RPL21P132-201ENST00000331267 462 ntBASIC3.27□□□□□ -1.89
RTCAO00442 RNU6-433P-201ENST00000363216 104 ntBASIC3.27□□□□□ -1.89
RTCAO00442 RNA5SP88-201ENST00000365560 109 ntBASIC3.27□□□□□ -1.89
RTCAO00442 MIR218-2-201ENST00000385006 110 ntBASIC3.27□□□□□ -1.89
RTCAO00442 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RTCAO00442 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.27□□□□□ -1.89
RTCAO00442 Z99755.1-201ENST00000414048 380 ntBASIC3.27□□□□□ -1.89
RTCAO00442 SPA17P1-201ENST00000416656 452 ntBASIC3.27□□□□□ -1.89
RTCAO00442 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.27□□□□□ -1.89
RTCAO00442 RPL7L1P10-201ENST00000427790 463 ntBASIC3.27□□□□□ -1.89
RTCAO00442 SAR1AP4-201ENST00000429225 591 ntBASIC3.27□□□□□ -1.89
RTCAO00442 AC104332.2-201ENST00000429959 156 ntBASIC3.27□□□□□ -1.89
RTCAO00442 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.27□□□□□ -1.89
RTCAO00442 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.27□□□□□ -1.89
RTCAO00442 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.27□□□□□ -1.89
RTCAO00442 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.27□□□□□ -1.89
RTCAO00442 RPL7P15-201ENST00000461190 712 ntBASIC3.27□□□□□ -1.89
RTCAO00442 RPS27P29-201ENST00000463110 252 ntBASIC3.27□□□□□ -1.89
RTCAO00442 FTH1P2-201ENST00000466086 412 ntBASIC3.27□□□□□ -1.89
RTCAO00442 AC104563.1-201ENST00000476147 376 ntBASIC3.27□□□□□ -1.89
RTCAO00442 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.27□□□□□ -1.89
RTCAO00442 TXNP6-201ENST00000510190 310 ntBASIC3.27□□□□□ -1.89
RTCAO00442 LTV1P1-201ENST00000510683 1237 ntBASIC3.27□□□□□ -1.89
RTCAO00442 AC119751.5-201ENST00000514077 770 ntBASIC3.27□□□□□ -1.89
RTCAO00442 SNORA67.7-201ENST00000516664 135 ntBASIC3.27□□□□□ -1.89
RTCAO00442 NDUFB9P3-201ENST00000521269 501 ntBASIC3.27□□□□□ -1.89
RTCAO00442 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.27□□□□□ -1.89
RTCAO00442 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.27□□□□□ -1.89
RTCAO00442 RPL23AP84-201ENST00000571193 464 ntBASIC3.27□□□□□ -1.89
RTCAO00442 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.27□□□□□ -1.89
RTCAO00442 AC019159.1-201ENST00000605094 187 ntBASIC3.27□□□□□ -1.89
RTCAO00442 AC090186.1-201ENST00000605991 572 ntBASIC3.27□□□□□ -1.89
RTCAO00442 AC090132.2-201ENST00000615881 347 ntBASIC3.27□□□□□ -1.89
RTCAO00442 AL607023.1-201ENST00000620045 248 ntBASIC3.27□□□□□ -1.89
RTCAO00442 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.27□□□□□ -1.89
RTCAO00442 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTCAO00442 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTCAO00442 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.26□□□□□ -1.89
RTCAO00442 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RTCAO00442 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RTCAO00442 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RTCAO00442 MIR30E-201ENST00000362104 92 ntBASIC3.26□□□□□ -1.89
RTCAO00442 Y_RNA.18-201ENST00000362461 102 ntBASIC3.26□□□□□ -1.89
RTCAO00442 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RTCAO00442 RNU6-1035P-201ENST00000384477 107 ntBASIC3.26□□□□□ -1.89
RTCAO00442 TPMTP3-201ENST00000411928 735 ntBASIC3.26□□□□□ -1.89
RTCAO00442 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RTCAO00442 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RTCAO00442 PPP1R11P2-201ENST00000423543 382 ntBASIC3.26□□□□□ -1.89
RTCAO00442 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.26□□□□□ -1.89
RTCAO00442 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.26□□□□□ -1.89
RTCAO00442 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.26□□□□□ -1.89
RTCAO00442 MTND1P26-201ENST00000440488 538 ntBASIC3.26□□□□□ -1.89
RTCAO00442 AL591503.2-201ENST00000442314 1005 ntBASIC3.26□□□□□ -1.89
RTCAO00442 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.26□□□□□ -1.89
RTCAO00442 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.26□□□□□ -1.89
RTCAO00442 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.26□□□□□ -1.89
RTCAO00442 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.26□□□□□ -1.89
RTCAO00442 SNORD121B-201ENST00000458838 81 ntBASIC3.26□□□□□ -1.89
RTCAO00442 MEMO1P3-201ENST00000459811 302 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms