Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.58□□□□□ -2.16
CNOT1A5YKK6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.58□□□□□ -2.16
CNOT1A5YKK6 AL133393.1-201ENST00000603277 287 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 AC096772.1-201ENST00000609146 564 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CNOT1A5YKK6 AC012640.5-201ENST00000623897 319 ntBASIC1.58□□□□□ -2.16
CNOT1A5YKK6 RNA5SP62-201ENST00000363457 110 ntBASIC1.57□□□□□ -2.16
CNOT1A5YKK6 RNU6-53P-201ENST00000365367 106 ntBASIC1.57□□□□□ -2.16
CNOT1A5YKK6 PRELID3BP11-201ENST00000414230 479 ntBASIC1.57□□□□□ -2.16
CNOT1A5YKK6 AC073464.3-201ENST00000422564 712 ntBASIC1.57□□□□□ -2.16
CNOT1A5YKK6 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.57□□□□□ -2.16
CNOT1A5YKK6 AC025033.1-201ENST00000463883 194 ntBASIC1.57□□□□□ -2.16
CNOT1A5YKK6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.57□□□□□ -2.16
CNOT1A5YKK6 AC080078.3-201ENST00000605407 463 ntBASIC1.57□□□□□ -2.16
CNOT1A5YKK6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.57□□□□□ -2.16
CNOT1A5YKK6 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CNOT1A5YKK6 AC009965.2-201ENST00000425328 970 ntBASIC1.57□□□□□ -2.16
CNOT1A5YKK6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.57□□□□□ -2.16
CNOT1A5YKK6 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.57□□□□□ -2.16
CNOT1A5YKK6 DUXAP8-207ENST00000456786 622 ntBASIC1.57□□□□□ -2.16
CNOT1A5YKK6 AC089999.1-201ENST00000460336 374 ntBASIC1.57□□□□□ -2.16
CNOT1A5YKK6 COX6CP14-201ENST00000469580 174 ntBASIC1.57□□□□□ -2.16
CNOT1A5YKK6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CNOT1A5YKK6 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.57□□□□□ -2.16
CNOT1A5YKK6 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.57□□□□□ -2.16
CNOT1A5YKK6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.57□□□□□ -2.16
CNOT1A5YKK6 NIFKP8-201ENST00000560500 874 ntBASIC1.57□□□□□ -2.16
CNOT1A5YKK6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.57□□□□□ -2.16
CNOT1A5YKK6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
CNOT1A5YKK6 AC009487.4-201ENST00000624969 3585 ntBASIC1.56□□□□□ -2.16
CNOT1A5YKK6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CNOT1A5YKK6 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
CNOT1A5YKK6 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.56□□□□□ -2.16
CNOT1A5YKK6 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.56□□□□□ -2.16
CNOT1A5YKK6 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
CNOT1A5YKK6 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.56□□□□□ -2.16
CNOT1A5YKK6 AC021087.2-201ENST00000504656 1203 ntBASIC1.56□□□□□ -2.16
CNOT1A5YKK6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.56□□□□□ -2.16
CNOT1A5YKK6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.56□□□□□ -2.16
CNOT1A5YKK6 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.56□□□□□ -2.16
CNOT1A5YKK6 VN1R84P-201ENST00000593697 235 ntBASIC1.56□□□□□ -2.16
CNOT1A5YKK6 AC011468.4-201ENST00000603942 409 ntBASIC1.56□□□□□ -2.16
CNOT1A5YKK6 ZNF355P-201ENST00000427301 3216 ntBASIC1.56□□□□□ -2.16
CNOT1A5YKK6 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CNOT1A5YKK6 DYNLT3P1-201ENST00000378574 347 ntBASIC1.56□□□□□ -2.16
CNOT1A5YKK6 MIR216A-201ENST00000385063 110 ntBASIC1.56□□□□□ -2.16
CNOT1A5YKK6 AC023128.2-201ENST00000420880 1223 ntBASIC1.56□□□□□ -2.16
CNOT1A5YKK6 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.56□□□□□ -2.16
CNOT1A5YKK6 AC009961.3-201ENST00000449832 765 ntBASIC1.56□□□□□ -2.16
CNOT1A5YKK6 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.56□□□□□ -2.16
CNOT1A5YKK6 SEM1P1-201ENST00000506694 209 ntBASIC1.56□□□□□ -2.16
CNOT1A5YKK6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.56□□□□□ -2.16
CNOT1A5YKK6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.56□□□□□ -2.16
CNOT1A5YKK6 AC010735.1-201ENST00000567305 1026 ntBASIC1.56□□□□□ -2.16
CNOT1A5YKK6 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.56□□□□□ -2.16
CNOT1A5YKK6 U73479.1-201ENST00000618062 168 ntBASIC1.56□□□□□ -2.16
CNOT1A5YKK6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
CNOT1A5YKK6 AL512283.1-201ENST00000606756 1384 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 AC025263.3-201ENST00000622965 1396 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.55□□□□□ -2.16
CNOT1A5YKK6 SNORD56.5-201ENST00000364281 72 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 RNA5SP139-201ENST00000364340 117 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 RNA5SP138-201ENST00000365098 114 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 DPPA2P1-201ENST00000428060 556 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 RPL21P2-201ENST00000440049 481 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.55□□□□□ -2.16
CNOT1A5YKK6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.55□□□□□ -2.16
CNOT1A5YKK6 SMARCE1P4-201ENST00000523647 241 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 CKAP2P1-201ENST00000555477 2049 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 AC092954.1-201ENST00000609121 445 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.55□□□□□ -2.16
CNOT1A5YKK6 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.55□□□□□ -2.16
CNOT1A5YKK6 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CNOT1A5YKK6 AL355596.1-201ENST00000565399 3996 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 RNA5SP363-201ENST00000365072 115 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 Y_RNA.390-201ENST00000383932 102 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 PAICSP7-201ENST00000419829 962 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.55□□□□□ -2.16
CNOT1A5YKK6 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC1.55□□□□□ -2.16
CNOT1A5YKK6 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.55□□□□□ -2.16
CNOT1A5YKK6 AC109464.2-201ENST00000510242 943 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 RNA5SP395-201ENST00000516567 118 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.55□□□□□ -2.16
CNOT1A5YKK6 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CNOT1A5YKK6 AC109446.2-201ENST00000567872 497 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.55□□□□□ -2.16
CNOT1A5YKK6 AC024560.3-201ENST00000608482 349 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 MKKS-204ENST00000639674 192 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 MTND4P1-201ENST00000457501 1466 ntBASIC1.55□□□□□ -2.16
CNOT1A5YKK6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CNOT1A5YKK6 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 RNU4-13P-201ENST00000364019 141 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 MIR193B-201ENST00000384907 83 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AP000567.1-201ENST00000406413 156 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.54□□□□□ -2.16
CNOT1A5YKK6 HSPE1P1-201ENST00000421494 318 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AP002345.1-201ENST00000456493 928 ntBASIC1.54□□□□□ -2.16
CNOT1A5YKK6 AC104435.1-201ENST00000483483 166 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms