Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 RNU6-715P-201ENST00000365204 103 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 SNORA4.3-201ENST00000365564 137 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 U3.42-201ENST00000408746 214 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 AC063979.1-201ENST00000415539 377 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 RPL21P91-201ENST00000429231 479 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 RPEP4-201ENST00000437636 602 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 PTMAP6-201ENST00000439110 327 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 RPS24P13-201ENST00000442520 397 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 AC000111.2-201ENST00000448200 210 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 AC133473.1-201ENST00000455173 299 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 AL590639.1-201ENST00000456484 337 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 RPL7P5-201ENST00000471472 736 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 AC012181.1-201ENST00000479895 423 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 RNA5SP92-201ENST00000516437 110 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 RNU6-875P-201ENST00000516488 106 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 RNU6-1314P-201ENST00000517139 104 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 Y_RNA.719-201ENST00000517156 106 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 RNU6-1315P-201ENST00000517187 99 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 RN7SKP256-201ENST00000517201 314 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 RN7SL652P-201ENST00000577769 300 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 RN7SL66P-201ENST00000582099 264 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 MIR548AC-201ENST00000585049 88 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 AF117829.1-206ENST00000621883 3802 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 AL049641.1-201ENST00000441055 1948 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 AC121333.1-201ENST00000567488 2709 ntBASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
GTF3C3Q9Y5Q9 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 AC022336.2-201ENST00000568966 2538 ntBASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 Y_RNA.70-201ENST00000362886 110 ntBASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 SNORA32.2-201ENST00000384049 122 ntBASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 POLHP1-201ENST00000411806 470 ntBASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 YPEL5P1-201ENST00000419731 367 ntBASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 RPS4XP1-201ENST00000482189 787 ntBASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 NARSP2-201ENST00000518524 679 ntBASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 AC087241.2-201ENST00000535801 324 ntBASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 OR11H5P-201ENST00000554039 926 ntBASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 MIR4727-201ENST00000622232 55 ntBASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 AL445363.3-201ENST00000623080 671 ntBASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 MTND4P35-201ENST00000604257 1375 ntBASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 HSPA8P4-201ENST00000511877 1920 ntBASIC6.29□□□□□ -1.4
GTF3C3Q9Y5Q9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 RNU6-371P-201ENST00000364283 108 ntBASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 RNU6-395P-201ENST00000365662 106 ntBASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 RN7SKP32-201ENST00000410167 303 ntBASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 AC092047.1-201ENST00000424997 240 ntBASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 ARL2BPP10-201ENST00000446487 531 ntBASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 FABP5P15-201ENST00000453566 214 ntBASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 RPL35AP28-201ENST00000459730 331 ntBASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 AC091951.2-201ENST00000500762 203 ntBASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 HIGD1AP13-201ENST00000509878 289 ntBASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 RNU6-189P-201ENST00000516120 101 ntBASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.28□□□□□ -1.4
GTF3C3Q9Y5Q9 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms