Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 OR5AK1P-201ENST00000524837 922 ntBASIC2.15□□□□□ -2.07
HDGFL3Q9Y3E1 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.15□□□□□ -2.07
HDGFL3Q9Y3E1 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.15□□□□□ -2.07
HDGFL3Q9Y3E1 HMGB1P14-201ENST00000557424 591 ntBASIC2.15□□□□□ -2.07
HDGFL3Q9Y3E1 SULT1C2P1-202ENST00000562418 459 ntBASIC2.15□□□□□ -2.07
HDGFL3Q9Y3E1 AC009163.5-201ENST00000575421 637 ntBASIC2.15□□□□□ -2.07
HDGFL3Q9Y3E1 MIR4672-201ENST00000583126 81 ntBASIC2.15□□□□□ -2.07
HDGFL3Q9Y3E1 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.15□□□□□ -2.07
HDGFL3Q9Y3E1 AC079089.3-201ENST00000603094 673 ntBASIC2.15□□□□□ -2.07
HDGFL3Q9Y3E1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.15□□□□□ -2.07
HDGFL3Q9Y3E1 AL356585.4-201ENST00000623078 1229 ntBASIC2.15□□□□□ -2.07
HDGFL3Q9Y3E1 AC025034.2-201ENST00000623264 286 ntBASIC2.15□□□□□ -2.07
HDGFL3Q9Y3E1 AC008568.2-201ENST00000623862 2313 ntBASIC2.15□□□□□ -2.07
HDGFL3Q9Y3E1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HDGFL3Q9Y3E1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.15□□□□□ -2.07
HDGFL3Q9Y3E1 GDI2P1-201ENST00000429312 1336 ntBASIC2.15□□□□□ -2.07
HDGFL3Q9Y3E1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 AC009812.4-201ENST00000569134 1805 ntBASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 Y_RNA.111-201ENST00000363248 100 ntBASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 RNU6-198P-201ENST00000384258 104 ntBASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 SNORD116-23-201ENST00000384645 92 ntBASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 RNU6-1197P-201ENST00000391183 107 ntBASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 PNPLA4P1-201ENST00000458328 305 ntBASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 RPL21P47-201ENST00000483696 477 ntBASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 AC026436.1-201ENST00000510537 270 ntBASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 AC021269.2-201ENST00000532318 330 ntBASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 NIFKP8-201ENST00000560500 874 ntBASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 AC105137.2-201ENST00000569073 466 ntBASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 AC061975.8-201ENST00000587058 721 ntBASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 AL161629.2-201ENST00000615347 275 ntBASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 AC243829.7-201ENST00000633081 225 ntBASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 CYP3A51P-201ENST00000633513 256 ntBASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.14□□□□□ -2.07
HDGFL3Q9Y3E1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 AC069528.2-201ENST00000624849 1991 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 SET-203ENST00000372688 801 ntTSL 2 BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 SNORA36C-201ENST00000384289 132 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 SNORD65C-201ENST00000390962 71 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 UBE2V1P2-201ENST00000397758 440 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 FCF1P2-201ENST00000415284 583 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 NANOGP5-201ENST00000424456 877 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 AL050341.1-201ENST00000447743 313 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 OR51B8P-201ENST00000449892 769 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 CDC42P1-201ENST00000456658 548 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 RN7SL636P-201ENST00000497504 294 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 AC084024.2-201ENST00000503480 791 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 RPL37P25-201ENST00000507308 276 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 AC109471.1-201ENST00000511631 612 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 RNA5SP82-201ENST00000516707 92 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 AC109329.2-201ENST00000519658 482 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 AC027309.2-201ENST00000520566 192 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 OR4R1P-201ENST00000529879 463 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 AC027176.1-201ENST00000560204 514 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 MIR5194-201ENST00000582634 120 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 AC245517.5-201ENST00000611529 162 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 AC106730.3-201ENST00000624568 641 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 TPTE2P4-201ENST00000258589 1605 ntBASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
HDGFL3Q9Y3E1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 DEFB108F-201ENST00000344638 222 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 TAS2R15P-201ENST00000390674 928 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 RN7SKP140-201ENST00000411196 284 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AF274854.1-201ENST00000413236 615 ntBASIC2.12□□□□□ -2.07
HDGFL3Q9Y3E1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms