Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SNORA11D-201ENST00000408548 128 ntBASIC7.18□□□□□ -1.26
RTN4Q9NQC3 SNORA11E-201ENST00000408778 128 ntBASIC7.18□□□□□ -1.26
RTN4Q9NQC3 AL662791.3-201ENST00000413771 776 ntBASIC7.18□□□□□ -1.26
RTN4Q9NQC3 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC7.18□□□□□ -1.26
RTN4Q9NQC3 ELOBP4-201ENST00000423418 296 ntBASIC7.18□□□□□ -1.26
RTN4Q9NQC3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC7.18□□□□□ -1.26
RTN4Q9NQC3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC7.18□□□□□ -1.26
RTN4Q9NQC3 AL451050.1-201ENST00000450126 415 ntBASIC7.18□□□□□ -1.26
RTN4Q9NQC3 RPS16P9-201ENST00000477220 427 ntBASIC7.18□□□□□ -1.26
RTN4Q9NQC3 Y_RNA.706-201ENST00000516933 99 ntBASIC7.18□□□□□ -1.26
RTN4Q9NQC3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC7.18□□□□□ -1.26
RTN4Q9NQC3 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.18□□□□□ -1.26
RTN4Q9NQC3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.18□□□□□ -1.26
RTN4Q9NQC3 COX6CP7-201ENST00000597056 208 ntBASIC7.18□□□□□ -1.26
RTN4Q9NQC3 AC073488.9-201ENST00000631601 754 ntBASIC7.18□□□□□ -1.26
RTN4Q9NQC3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RTN4Q9NQC3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC7.18□□□□□ -1.26
RTN4Q9NQC3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC7.18□□□□□ -1.26
RTN4Q9NQC3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
RTN4Q9NQC3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RTN4Q9NQC3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC7.17□□□□□ -1.26
RTN4Q9NQC3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
RTN4Q9NQC3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC7.17□□□□□ -1.26
RTN4Q9NQC3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RTN4Q9NQC3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC7.17□□□□□ -1.26
RTN4Q9NQC3 RN7SKP189-201ENST00000365042 330 ntBASIC7.17□□□□□ -1.26
RTN4Q9NQC3 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.17□□□□□ -1.26
RTN4Q9NQC3 RNU6-847P-201ENST00000411115 108 ntBASIC7.17□□□□□ -1.26
RTN4Q9NQC3 YPEL5P1-201ENST00000419731 367 ntBASIC7.17□□□□□ -1.26
RTN4Q9NQC3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC7.17□□□□□ -1.26
RTN4Q9NQC3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC7.17□□□□□ -1.26
RTN4Q9NQC3 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.17□□□□□ -1.26
RTN4Q9NQC3 AC125238.1-201ENST00000448842 249 ntBASIC7.17□□□□□ -1.26
RTN4Q9NQC3 NUTF2P7-201ENST00000453086 375 ntBASIC7.17□□□□□ -1.26
RTN4Q9NQC3 RNU7-169P-201ENST00000459456 61 ntBASIC7.17□□□□□ -1.26
RTN4Q9NQC3 RN7SL492P-201ENST00000460700 295 ntBASIC7.17□□□□□ -1.26
RTN4Q9NQC3 RPL23AP14-201ENST00000468281 468 ntBASIC7.17□□□□□ -1.26
RTN4Q9NQC3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
RTN4Q9NQC3 SLC25A15P5-201ENST00000508033 253 ntBASIC7.17□□□□□ -1.26
RTN4Q9NQC3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.17□□□□□ -1.26
RTN4Q9NQC3 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.17□□□□□ -1.26
RTN4Q9NQC3 AC000068.2-201ENST00000608816 460 ntBASIC7.17□□□□□ -1.26
RTN4Q9NQC3 AC116165.3-201ENST00000614524 400 ntBASIC7.17□□□□□ -1.26
RTN4Q9NQC3 AC116667.2-201ENST00000641075 823 ntBASIC7.17□□□□□ -1.26
RTN4Q9NQC3 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.17□□□□□ -1.26
RTN4Q9NQC3 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RTN4Q9NQC3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
RTN4Q9NQC3 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.17□□□□□ -1.26
RTN4Q9NQC3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RTN4Q9NQC3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RTN4Q9NQC3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RTN4Q9NQC3 RNA5SP350-201ENST00000363298 111 ntBASIC7.16□□□□□ -1.26
RTN4Q9NQC3 RNU6-898P-201ENST00000365627 104 ntBASIC7.16□□□□□ -1.26
RTN4Q9NQC3 Z98749.2-208ENST00000381646 500 ntBASIC7.16□□□□□ -1.26
RTN4Q9NQC3 SNORA51.11-201ENST00000384442 131 ntBASIC7.16□□□□□ -1.26
RTN4Q9NQC3 RNU1-56P-201ENST00000391303 164 ntBASIC7.16□□□□□ -1.26
RTN4Q9NQC3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC7.16□□□□□ -1.26
RTN4Q9NQC3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC7.16□□□□□ -1.26
RTN4Q9NQC3 CR391992.1-201ENST00000438601 394 ntBASIC7.16□□□□□ -1.26
RTN4Q9NQC3 AC098831.1-201ENST00000440661 216 ntBASIC7.16□□□□□ -1.26
RTN4Q9NQC3 RPL26P9-201ENST00000457466 433 ntBASIC7.16□□□□□ -1.26
RTN4Q9NQC3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RTN4Q9NQC3 AC233702.7-202ENST00000582941 211 ntBASIC7.16□□□□□ -1.26
RTN4Q9NQC3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RTN4Q9NQC3 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RTN4Q9NQC3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RTN4Q9NQC3 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RTN4Q9NQC3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC7.15□□□□□ -1.26
RTN4Q9NQC3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RTN4Q9NQC3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
RTN4Q9NQC3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RTN4Q9NQC3 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RTN4Q9NQC3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
RTN4Q9NQC3 RNU4-9P-201ENST00000364951 139 ntBASIC7.15□□□□□ -1.26
RTN4Q9NQC3 Y_RNA.476-201ENST00000384347 108 ntBASIC7.15□□□□□ -1.26
RTN4Q9NQC3 MIR190B-201ENST00000401119 79 ntBASIC7.15□□□□□ -1.26
RTN4Q9NQC3 SNORA11B-201ENST00000408175 129 ntBASIC7.15□□□□□ -1.26
RTN4Q9NQC3 Y_RNA.592-201ENST00000410274 109 ntBASIC7.15□□□□□ -1.26
RTN4Q9NQC3 SRSF1P1-201ENST00000424058 520 ntBASIC7.15□□□□□ -1.26
RTN4Q9NQC3 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC7.15□□□□□ -1.26
RTN4Q9NQC3 RPL7AP49-201ENST00000429522 581 ntBASIC7.15□□□□□ -1.26
RTN4Q9NQC3 AL591438.1-201ENST00000433508 581 ntBASIC7.15□□□□□ -1.26
RTN4Q9NQC3 AL022324.2-201ENST00000434827 780 ntBASIC7.15□□□□□ -1.26
RTN4Q9NQC3 AC013403.1-201ENST00000436954 263 ntBASIC7.15□□□□□ -1.26
RTN4Q9NQC3 HMGN2P16-201ENST00000456802 261 ntBASIC7.15□□□□□ -1.26
RTN4Q9NQC3 RN7SL456P-201ENST00000469290 295 ntBASIC7.15□□□□□ -1.26
RTN4Q9NQC3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC7.15□□□□□ -1.26
RTN4Q9NQC3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC7.15□□□□□ -1.26
RTN4Q9NQC3 AL390198.2-201ENST00000510553 222 ntBASIC7.15□□□□□ -1.26
RTN4Q9NQC3 RNY3P15-201ENST00000516297 97 ntBASIC7.15□□□□□ -1.26
RTN4Q9NQC3 CARSP2-201ENST00000520688 277 ntBASIC7.15□□□□□ -1.26
RTN4Q9NQC3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC7.15□□□□□ -1.26
RTN4Q9NQC3 MIR3609-201ENST00000582661 80 ntBASIC7.15□□□□□ -1.26
RTN4Q9NQC3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC7.15□□□□□ -1.26
RTN4Q9NQC3 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.15□□□□□ -1.26
RTN4Q9NQC3 AC090617.7-201ENST00000623952 126 ntBASIC7.15□□□□□ -1.26
RTN4Q9NQC3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RTN4Q9NQC3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC7.15□□□□□ -1.27
RTN4Q9NQC3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RTN4Q9NQC3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms