Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC007954.1-201ENST00000554198 494 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AC060771.1-201ENST00000582031 164 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 MIR6076-201ENST00000617521 113 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AC110801.1-201ENST00000623590 212 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AC079597.1-201ENST00000624306 508 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AC097520.1-201ENST00000624435 385 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.18□□□□□ -1.9
UBQLN3Q9H347 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBQLN3Q9H347 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 AC092326.2-201ENST00000624772 1561 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 MIR208A-201ENST00000362287 71 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 SNORD46.1-201ENST00000364139 104 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 RNU1-33P-201ENST00000364249 162 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 RNU6-637P-201ENST00000384050 107 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 SNORD17-201ENST00000390930 237 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 RPS4XP3-201ENST00000398541 413 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 HSFY4P-201ENST00000415994 1181 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 TMEM167AP1-201ENST00000423409 219 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 MTND4P20-201ENST00000424125 869 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 MTATP6P4-201ENST00000427725 675 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 RPL7P34-201ENST00000433316 712 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 BX679664.1-201ENST00000434429 253 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 FAM103A2P-201ENST00000444122 354 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 RPL36AP33-201ENST00000450395 310 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 AL133217.1-201ENST00000450980 425 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 CYCSP35-201ENST00000451978 304 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 ART2BP-201ENST00000453501 499 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 RPS4XP2-201ENST00000458402 793 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 snoU13.22-201ENST00000459428 104 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 AC091153.1-201ENST00000466297 402 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 AC021205.2-201ENST00000480069 347 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 RPL30P14-201ENST00000482744 348 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 SNORD59.2-201ENST00000516873 68 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 MIR2276-201ENST00000516886 89 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 RNU6-798P-201ENST00000516912 103 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 SETP2-201ENST00000553886 926 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 AC090616.2-202ENST00000584248 222 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 AC004067.1-201ENST00000608733 700 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 AL355365.1-201ENST00000616480 294 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 MIR6130-201ENST00000619419 109 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 AL356266.1-201ENST00000623311 483 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 AL356274.2-201ENST00000624379 3752 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 AC005832.2-201ENST00000538921 1430 ntBASIC3.17□□□□□ -1.9
UBQLN3Q9H347 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN3Q9H347 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 RNA5SP50-201ENST00000363731 107 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 RNA5SP72-201ENST00000364442 117 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 SNORA70.4-201ENST00000365509 134 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 RNU6-769P-201ENST00000384407 104 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 MIR34B-201ENST00000385076 84 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AF228730.1-201ENST00000397972 663 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 RNU6-516P-201ENST00000411381 104 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AL359704.1-201ENST00000411586 781 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 RPL23AP39-201ENST00000415533 405 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AC006946.1-201ENST00000429106 328 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AC097713.2-201ENST00000430199 356 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AC090774.1-201ENST00000435925 246 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 RPL26P6-201ENST00000440913 438 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AP002884.2-201ENST00000471647 395 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AC068587.2-201ENST00000478386 781 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 AC025518.1-201ENST00000479856 347 ntBASIC3.16□□□□□ -1.9
UBQLN3Q9H347 RPS4XP22-201ENST00000480755 780 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms