Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 SKINT1L-201ENST00000401057 817 ntBASIC3.94□□□□□ -1.78
USP44Q9H0E7 AL031577.2-201ENST00000404133 280 ntBASIC3.94□□□□□ -1.78
USP44Q9H0E7 AL138799.3-201ENST00000438968 350 ntBASIC3.94□□□□□ -1.78
USP44Q9H0E7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.94□□□□□ -1.78
USP44Q9H0E7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.94□□□□□ -1.78
USP44Q9H0E7 TMED11P-201ENST00000479478 690 ntBASIC3.94□□□□□ -1.78
USP44Q9H0E7 AC034159.1-201ENST00000513885 583 ntBASIC3.94□□□□□ -1.78
USP44Q9H0E7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.94□□□□□ -1.78
USP44Q9H0E7 RNU2-58P-201ENST00000516403 183 ntBASIC3.94□□□□□ -1.78
USP44Q9H0E7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.94□□□□□ -1.78
USP44Q9H0E7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.94□□□□□ -1.78
USP44Q9H0E7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USP44Q9H0E7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.94□□□□□ -1.78
USP44Q9H0E7 AC126177.3-201ENST00000551839 688 ntBASIC3.94□□□□□ -1.78
USP44Q9H0E7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.94□□□□□ -1.78
USP44Q9H0E7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.94□□□□□ -1.78
USP44Q9H0E7 AC007687.1-201ENST00000602704 304 ntBASIC3.94□□□□□ -1.78
USP44Q9H0E7 AC079597.1-201ENST00000624306 508 ntBASIC3.94□□□□□ -1.78
USP44Q9H0E7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.94□□□□□ -1.78
USP44Q9H0E7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.94□□□□□ -1.78
USP44Q9H0E7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
USP44Q9H0E7 EXOC5P1-201ENST00000510543 1969 ntBASIC3.94□□□□□ -1.78
USP44Q9H0E7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.94□□□□□ -1.78
USP44Q9H0E7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.94□□□□□ -1.78
USP44Q9H0E7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.94□□□□□ -1.78
USP44Q9H0E7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP44Q9H0E7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.93□□□□□ -1.78
USP44Q9H0E7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USP44Q9H0E7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
USP44Q9H0E7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.93□□□□□ -1.78
USP44Q9H0E7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.93□□□□□ -1.78
USP44Q9H0E7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USP44Q9H0E7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.93□□□□□ -1.78
USP44Q9H0E7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.93□□□□□ -1.78
USP44Q9H0E7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
USP44Q9H0E7 OR1S2-201ENST00000302592 978 ntBASIC3.93□□□□□ -1.78
USP44Q9H0E7 RPL7P26-201ENST00000333817 754 ntBASIC3.93□□□□□ -1.78
USP44Q9H0E7 RNU6-289P-201ENST00000364093 107 ntBASIC3.93□□□□□ -1.78
USP44Q9H0E7 MTND1P21-201ENST00000412991 285 ntBASIC3.93□□□□□ -1.78
USP44Q9H0E7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USP44Q9H0E7 AC090960.1-201ENST00000421072 306 ntBASIC3.93□□□□□ -1.78
USP44Q9H0E7 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.93□□□□□ -1.78
USP44Q9H0E7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.93□□□□□ -1.78
USP44Q9H0E7 AL390023.1-201ENST00000428836 262 ntBASIC3.93□□□□□ -1.78
USP44Q9H0E7 MTCYBP45-201ENST00000435243 565 ntBASIC3.93□□□□□ -1.78
USP44Q9H0E7 AL671855.1-201ENST00000446875 1203 ntBASIC3.93□□□□□ -1.78
USP44Q9H0E7 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.93□□□□□ -1.78
USP44Q9H0E7 AC010285.1-201ENST00000470580 392 ntBASIC3.93□□□□□ -1.78
USP44Q9H0E7 AC021382.1-201ENST00000483523 359 ntBASIC3.93□□□□□ -1.78
USP44Q9H0E7 AC068305.1-201ENST00000497406 726 ntBASIC3.93□□□□□ -1.78
USP44Q9H0E7 AC026427.2-201ENST00000506228 536 ntBASIC3.93□□□□□ -1.78
USP44Q9H0E7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.93□□□□□ -1.78
USP44Q9H0E7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.93□□□□□ -1.78
USP44Q9H0E7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.93□□□□□ -1.78
USP44Q9H0E7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.93□□□□□ -1.78
USP44Q9H0E7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.93□□□□□ -1.78
USP44Q9H0E7 XIAPP1-201ENST00000603162 600 ntBASIC3.93□□□□□ -1.78
USP44Q9H0E7 AC012669.1-201ENST00000603209 283 ntBASIC3.93□□□□□ -1.78
USP44Q9H0E7 AC121247.2-201ENST00000604776 136 ntBASIC3.93□□□□□ -1.78
USP44Q9H0E7 AC097468.3-201ENST00000607956 456 ntBASIC3.93□□□□□ -1.78
USP44Q9H0E7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.93□□□□□ -1.78
USP44Q9H0E7 MIR622-201ENST00000638396 96 ntBASIC3.93□□□□□ -1.78
USP44Q9H0E7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP44Q9H0E7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP44Q9H0E7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USP44Q9H0E7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP44Q9H0E7 PWAR6-201ENST00000552334 4618 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USP44Q9H0E7 RNU4-40P-201ENST00000364351 143 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 RNU6-1074P-201ENST00000383995 104 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 DUTP6-201ENST00000425573 462 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 RPL21P66-201ENST00000426566 466 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 RPS12P18-201ENST00000442381 270 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 AL024509.2-201ENST00000493462 493 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 AC008885.1-201ENST00000514930 301 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 IGKV2D-23-201ENST00000518179 286 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 AC091515.1-201ENST00000548110 679 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 AC004024.1-201ENST00000549244 247 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 MIR4644-201ENST00000579929 84 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 MTCYBP22-201ENST00000603788 447 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 AC106028.5-201ENST00000610332 395 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 AC093783.1-201ENST00000612976 329 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms